CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016252.1-P	Field mustard	cytosol	73.77	58.7
CDY11636	Canola	mitochondrion	73.77	58.7
CDY38774	Canola	cytosol	74.32	53.33
CDY56090	Canola	mitochondrion	60.11	52.88
CDY28452	Canola	cytosol	55.74	52.04
CDY11637	Canola	mitochondrion	63.93	51.32
CDY38773	Canola	cytosol	63.39	50.88
CDY25824	Canola	cytosol	54.64	49.75
CDY16220	Canola	cytosol	60.66	48.9
CDY14704	Canola	cytosol	60.11	48.25
AT1G69920.1	Thale cress	cytosol	65.03	46.85
CDY40288	Canola	cytosol, plastid	57.92	46.7
CDY48383	Canola	cytosol	46.99	36.75
CDY23533	Canola	cytosol	46.99	36.75
CDY11635	Canola	cytosol	46.45	36.32
CDY38775	Canola	cytosol	46.45	36.32
CDY65968	Canola	cytosol	45.36	36.09
CDY56091	Canola	cytosol	44.81	35.65
CDY37985	Canola	cytosol	38.8	31.28
CDY37984	Canola	cytosol	38.25	30.84
CDX93432	Canola	cytosol	38.25	30.84
KRH74742	Soybean	nucleus	39.34	30.77
HORVU5Hr1G058000.8	Barley	cytosol	37.7	29.74
TraesCS5B01G192400.1	Wheat	cytosol	37.16	29.44
TraesCS5D01G200100.1	Wheat	cytosol	37.16	29.44
TraesCS5A01G190900.1	Wheat	cytosol	36.61	29.0
CDY34896	Canola	cytosol	35.52	28.63
CDY30898	Canola	cytosol	36.61	28.63
KRH69402	Soybean	nucleus	36.07	28.45
GSMUA_Achr1P03800_001	Banana	cytosol	34.97	28.19
GSMUA_Achr5P10340_001	Banana	cytosol	35.52	28.02
CDY45138	Canola	cytosol	33.88	27.93
CDX77247	Canola	cytosol	33.88	27.68
EER92036	Sorghum	cytosol	35.52	27.66
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.88	27.56
TraesCS1B01G194900.1	Wheat	cytosol	35.52	27.43
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.97	27.23
GSMUA_Achr5P10360_001	Banana	cytosol	35.52	27.2
EER92034	Sorghum	endoplasmic reticulum	34.43	27.16
Os10t0525800-00	Rice	cytosol	32.24	27.06
KRH69403	Soybean	extracellular	19.67	26.87
CDY30896	Canola	cytosol	33.88	26.84
TraesCS1D01G189600.1	Wheat	cytosol	34.43	26.58
EES00905	Sorghum	cytosol	34.43	26.58
KRH69404	Soybean	nucleus	33.33	26.29
TraesCS1A01G187000.1	Wheat	cytosol	33.88	26.16
HORVU1Hr1G049090.2	Barley	cytosol	33.88	26.05
Os10t0481300-01	Rice	cytosol	28.96	25.98
GSMUA_Achr5P10350_001	Banana	cytosol	33.33	25.85
Os10t0525400-01	Rice	cytosol, plastid	33.88	25.41
EER92035	Sorghum	cytosol	33.33	25.31
Zm00001d027557_P001	Maize	cytosol	34.97	25.2
CDX68020	Canola	cytosol	4.92	25.0
CDY48477	Canola	cytosol	25.68	24.61
HORVU1Hr1G049070.1	Barley	cytosol	33.88	23.94
CDY07793	Canola	cytosol	20.77	23.75
CDX79259	Canola	cytosol	28.42	23.74
CDX68018	Canola	cytosol	27.87	23.39
CDX79258	Canola	cytosol	14.21	23.21
CDX68019	Canola	cytosol	27.87	23.18
CDY26267	Canola	cytosol	26.78	22.79
CDX79260	Canola	cytosol	26.78	22.58
CDX68017	Canola	cytosol	26.78	22.58
CDY45140	Canola	cytosol	15.3	22.05
CDX88438	Canola	cytosol	26.23	22.02
CDX88439	Canola	cytosol	26.23	22.02
CDX96787	Canola	cytosol	26.23	21.92
CDX83922	Canola	cytosol	26.23	21.92
CDY14615	Canola	cytosol	26.23	21.92
CDX81807	Canola	cytosol	25.68	21.56
CDX68016	Canola	cytosol	25.68	21.46
CDX79261	Canola	cytosol	25.68	21.46
CDY21758	Canola	cytosol	25.14	21.0
CDX81808	Canola	cytosol	25.14	21.0
CDY26861	Canola	cytosol	25.14	21.0
CDX88441	Canola	cytosol	25.14	20.81
CDX87952	Canola	cytosol	25.68	20.7
CDX87452	Canola	cytosol	24.59	20.45
CDX81810	Canola	cytosol	24.04	20.09
CDY21757	Canola	cytosol	24.04	20.09
CDY58045	Canola	cytosol	24.59	20.09
CDX88440	Canola	cytosol	24.04	20.0
CDY12324	Canola	cytosol	24.59	19.82
CDY25833	Canola	cytosol	24.04	19.64
CDY26266	Canola	cytosol	23.5	19.63
Os10t0525500-01	Rice	cytosol, plastid	15.3	19.44
CDY25831	Canola	cytosol	23.5	19.2
CDY21756	Canola	cytosol	22.95	19.18
CDY48476	Canola	cytosol	22.95	19.18
CDX81809	Canola	cytosol	22.95	19.18
CDY48475	Canola	cytosol	16.94	18.34
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	27.32	17.3

Protein Annotations

EnsemblPlants:CDY23534	EnsemblPlantsGene:GSBRNA2T00022180001	Gene3D:1.20.1050.10	Gene3D:3.40.30.10	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Thioredoxin-like_sf
PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	ProteinID:CDY23534	ProteinID:CDY23534.1	SEG:seg	SUPFAM:SSF47616
SUPFAM:SSF52833	UniParc:UPI0004EDFF41	UniProt:A0A078GE01	MapMan:35.1	:	:

Description

BnaC06g25030DBnaC06g25030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE01]

Coordinates

chrLK032144:+:438307..439081

Molecular Weight (calculated)

19714.8 Da

IEP (calculated)

8.938

GRAVY (calculated)

0.053

Length

183 amino acids

Sequence
(BLAST)

001: MTQNGSNGTV KLLGTWSSPF ALRGRIALHL KSVEYEYIEE ATKPGRQSLP SRHCSFLGSL RRRKGYVLLQ LFAFESINAT PGGAAAGNLM GCLVALEEAF
101: QKSSKGGGFC GGENIGFVDI VCGAIVGPFS VIEVFSGVKL LSPDVTPGLV QWAERFRAHE AVKPYMPSVA EFVEFAKQKL NAQ

Best Arabidopsis Sequence Match ( AT1G27130.1 )
(BLAST)

001: MAQNDTVKLI GSWSSPYSLR ARVALHLKSV KYEYLDEPDV LKEKSELLLK SNPIHKKVPV LLHGDLSISE SLNVVQYVDE AWPSVPSILP SDAYDRASAR
101: FWAQYIDDKC FAAVDAVVGA KDDEGKMAAV GKLMECLAIL EETFQKSSKG LGFFGGETIG YLDIACSALL GPISVIEAFS GVKFLRQETT PGLIKWAERF
201: RAHEAVKPYM PTVEEVVAFA KQKFNVQ

Arabidopsis Description

GSTU13Glutathione S-transferase U13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.