CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX97887
CDY51369

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	CDX97887	AT2G29420.1	21798944
AT1G17180.1	CDY51369	AT2G29420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26266	Canola	cytosol	98.17	98.17
CDY21758	Canola	cytosol	87.21	87.21
CDX81808	Canola	cytosol	86.76	86.76
CDY21757	Canola	cytosol	83.11	83.11
AT1G17180.1	Thale cress	cytosol	82.19	81.45
CDX81809	Canola	cytosol	81.28	81.28
CDX81810	Canola	cytosol	79.45	79.45
CDY21756	Canola	cytosol	78.54	78.54
CDY26267	Canola	cytosol	72.15	73.49
CDY48475	Canola	cytosol	55.71	72.19
CDX81807	Canola	cytosol	71.23	71.56
CDX79258	Canola	cytosol	36.53	71.43
CDX79261	Canola	cytosol	71.23	71.23
CDX68016	Canola	cytosol	70.78	70.78
CDY14615	Canola	cytosol	70.78	70.78
CDY26861	Canola	cytosol	70.78	70.78
CDX68019	Canola	cytosol	68.49	68.18
CDX88441	Canola	cytosol	66.21	65.61
CDX87452	Canola	cytosol	65.75	65.45
CDX79260	Canola	cytosol	64.84	65.44
CDX96787	Canola	cytosol	65.3	65.3
CDX83922	Canola	cytosol	65.3	65.3
CDX88440	Canola	cytosol	65.3	65.0
CDX68017	Canola	cytosol	64.38	64.98
CDX88439	Canola	cytosol	63.93	64.22
CDX88438	Canola	cytosol	63.93	64.22
CDX68018	Canola	cytosol	63.01	63.3
CDY48477	Canola	cytosol	54.34	62.3
CDX79259	Canola	cytosol	62.1	62.1
Solyc12g011310.1.1	Tomato	plastid	61.64	61.64
Solyc07g056490.2.1	Tomato	extracellular	60.73	60.73
KRH13622	Soybean	cytosol	47.03	60.23
PGSC0003DMT400038054	Potato	endoplasmic reticulum	59.36	59.36
KRH43843	Soybean	cytosol	58.9	58.9
CDY58045	Canola	cytosol	59.82	58.48
CDY25833	Canola	cytosol	59.82	58.48
VIT_19s0093g00400.t01	Wine grape	cytosol	58.9	58.37
KRH43845	Soybean	cytosol	58.9	58.11
VIT_19s0093g00370.t01	Wine grape	cytosol	31.96	57.85
KRH02498	Soybean	cytosol	57.53	57.8
CDY25831	Canola	cytosol	58.9	57.59
VIT_19s0093g00350.t01	Wine grape	cytosol	57.99	57.47
PGSC0003DMT400071059	Potato	cytosol	57.53	57.27
VIT_19s0093g00320.t01	Wine grape	cytosol	56.62	56.11
VIT_10s0003g04250.t01	Wine grape	cytosol	24.2	55.79
KRH13620	Soybean	cytosol	55.71	55.2
KRH13625	Soybean	cytosol	54.34	54.34
KRH43846	Soybean	cytosol	48.86	52.45
CDX87952	Canola	cytosol	53.42	51.54
CDY12324	Canola	cytosol	52.97	51.1
CDY45140	Canola	cytosol	27.4	47.24
CDY07793	Canola	cytosol	29.68	40.62
CDY45138	Canola	cytosol	39.27	38.74
CDX77247	Canola	cytosol	39.27	38.39
CDY30898	Canola	cytosol	40.64	38.03
CDY34896	Canola	cytosol	39.27	37.89
CDY37984	Canola	cytosol	38.81	37.44
CDY37985	Canola	cytosol	38.36	37.0
CDY30896	Canola	cytosol	38.81	36.8
CDX93432	Canola	cytosol	37.9	36.56
CDX68020	Canola	cytosol	5.94	36.11
CDY56090	Canola	mitochondrion	33.33	35.1
CDY16220	Canola	cytosol	35.16	33.92
CDY11636	Canola	mitochondrion	35.62	33.91
CDY14704	Canola	cytosol	35.16	33.77
CDY40288	Canola	cytosol, plastid	34.7	33.48
CDY65968	Canola	cytosol	35.16	33.48
CDY48383	Canola	cytosol	35.62	33.33
CDY23533	Canola	cytosol	35.62	33.33
CDY56091	Canola	cytosol	34.7	33.04
CDY11635	Canola	cytosol	35.16	32.91
CDY38775	Canola	cytosol	35.16	32.91
CDY11637	Canola	mitochondrion	34.25	32.89
CDY38773	Canola	cytosol	34.25	32.89
CDY28452	Canola	cytosol	27.4	30.61
CDY38774	Canola	cytosol	35.16	30.2
CDY25824	Canola	cytosol	26.94	29.35
CDY23534	Canola	cytosol, mitochondrion, plastid	19.18	22.95

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078IEL2	EnsemblPlants:CDY48476	ProteinID:CDY48476
ProteinID:CDY48476.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00091169001	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF41B6	SEG:seg	:	:	:

Description

BnaC05g13360DBnaC05g13360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEL2]

Coordinates

chrLK032775:+:63457..64376

Molecular Weight (calculated)

25197.2 Da

IEP (calculated)

5.061

GRAVY (calculated)

-0.388

Length

219 amino acids

Sequence
(BLAST)

001: MADEVILLDY WPSAFGMRTR IALEEKDIKF DHREQDLFNK SQILLEMNPV HKKIPVLIHN GKPVCESLIQ VEYIDETWPG GNSLLPSDPY QRAQAKFWGD
101: FIDKKVSGPT WVLWGGKGEE QEAGKKEFIE VLKTLETELG DKTYFGGETF GYVDIALIGF YCWFDAYEKF ANFSIEAECP KVIAWAKRCL KRESVAKSLP
201: DSDKITKYVP ELKKRLGME

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.