Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0015g02560.t01 Wine grape cytosol 75.0 76.36
VIT_00s0240g00020.t01 Wine grape cytosol 75.89 72.03
VIT_19s0015g02830.t01 Wine grape cytosol 74.11 69.17
VIT_19s0015g02690.t01 Wine grape cytosol 75.89 52.15
CDY45140 Canola cytosol 53.57 47.24
CDX68019 Canola cytosol 91.07 46.36
AT1G78320.1 Thale cress cytosol 84.82 43.18
VIT_19s0015g02880.t01 Wine grape cytosol 77.68 41.83
VIT_19s0015g02590.t01 Wine grape cytosol 77.68 41.63
CDY26861 Canola cytosol 77.68 39.73
CDY14615 Canola cytosol 76.79 39.27
VIT_19s0015g02680.t01 Wine grape cytosol 76.79 39.27
VIT_19s0015g02730.t01 Wine grape cytosol 75.89 38.81
VIT_19s0015g02700.t01 Wine grape cytosol 75.89 38.81
CDX79261 Canola cytosol 75.89 38.81
VIT_19s0015g02890.t01 Wine grape cytosol 75.89 38.81
VIT_19s0093g00260.t01 Wine grape cytosol 75.89 38.81
CDX68016 Canola cytosol 75.89 38.81
CDX87452 Canola cytosol 75.89 38.64
CDY26267 Canola cytosol 74.11 38.6
VIT_19s0093g00310.t01 Wine grape cytosol 75.0 38.36
VIT_19s0093g00110.t01 Wine grape cytosol 75.0 38.36
VIT_19s0093g00150.t01 Wine grape cytosol 75.0 38.36
CDX88440 Canola cytosol 75.0 38.18
VIT_19s0093g00190.t01 Wine grape cytosol 74.11 37.9
CDY21758 Canola cytosol 74.11 37.9
CDY07793 Canola cytosol 53.57 37.5
CDX81808 Canola cytosol 73.21 37.44
VIT_00s0240g00050.t01 Wine grape cytosol 73.21 37.44
CDX88441 Canola cytosol 73.21 37.1
CDX81810 Canola cytosol 72.32 36.99
CDY26266 Canola cytosol 72.32 36.99
VIT_19s0027g00460.t01 Wine grape cytosol 73.21 36.77
CDX68018 Canola cytosol 71.43 36.7
CDX88438 Canola cytosol 71.43 36.7
CDX88439 Canola cytosol 71.43 36.7
CDX83922 Canola cytosol 71.43 36.53
CDX79259 Canola cytosol 71.43 36.53
CDX96787 Canola cytosol 71.43 36.53
CDY48476 Canola cytosol 71.43 36.53
CDX81807 Canola cytosol 70.54 36.24
VIT_19s0093g00220.t01 Wine grape cytosol 73.21 36.12
CDY21756 Canola cytosol 70.54 36.07
CDX81809 Canola cytosol 69.64 35.62
Solyc12g011300.1.1 Tomato cytosol 69.64 35.45
CDY21757 Canola cytosol 67.86 34.7
CDX68017 Canola cytosol 66.07 34.1
PGSC0003DMT400054729 Potato cytosol 66.96 33.94
CDX79260 Canola cytosol 65.18 33.64
Solyc10g007640.2.1 Tomato cytosol 65.18 33.03
Solyc10g007620.1.1 Tomato cytosol 62.5 31.96
PGSC0003DMT400092412 Potato cytosol 62.5 31.96
PGSC0003DMT400020286 Potato cytosol 57.14 31.37
CDY56090 Canola mitochondrion 57.14 30.77
CDY58045 Canola cytosol 60.71 30.36
CDY25833 Canola cytosol 58.93 29.46
CDY25831 Canola cytosol 58.93 29.46
CDY48477 Canola cytosol 49.11 28.8
CDX87952 Canola cytosol 58.04 28.63
CDY12324 Canola cytosol 58.04 28.63
CDY11636 Canola mitochondrion 57.14 27.83
VIT_19s0093g00160.t01 Wine grape cytosol 51.79 27.75
CDY48475 Canola cytosol 41.07 27.22
CDY11637 Canola mitochondrion 55.36 27.19
CDY38773 Canola cytosol 55.36 27.19
CDY45138 Canola cytosol 53.57 27.03
CDY40288 Canola cytosol, plastid 54.46 26.87
CDX77247 Canola cytosol 53.57 26.79
CDY14704 Canola cytosol 54.46 26.75
CDY16220 Canola cytosol 53.57 26.43
CDY37984 Canola cytosol 53.57 26.43
CDY65968 Canola cytosol 53.57 26.09
CDY30898 Canola cytosol 54.46 26.07
VIT_19s0015g02610.t01 Wine grape cytosol 75.89 25.99
CDY37985 Canola cytosol 52.68 25.99
CDY34896 Canola cytosol 52.68 25.99
CDX93432 Canola cytosol 52.68 25.99
CDY30896 Canola cytosol 53.57 25.97
CDY56091 Canola cytosol 52.68 25.65
CDY23533 Canola cytosol 52.68 25.21
CDY38775 Canola cytosol 52.68 25.21
CDY48383 Canola cytosol 52.68 25.21
CDY11635 Canola cytosol 52.68 25.21
CDY38774 Canola cytosol 56.25 24.71
CDY28452 Canola cytosol 38.39 21.94
CDY25824 Canola cytosol 38.39 21.39
CDY23534 Canola cytosol, mitochondrion, plastid 23.21 14.21
CDX68020 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX79258EnsemblPlantsGene:GSBRNA2T00131891001Gene3D:1.20.1050.10Gene3D:3.40.30.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:Thioredoxin-like_sfPANTHER:PTHR11260PANTHER:PTHR11260:SF493
PFAM:PF02798PFscan:PS50404ProteinID:CDX79258ProteinID:CDX79258.1SUPFAM:SSF52833UniParc:UPI0004EE3BA7
MapMan:18.8.1.4:::::
Description
BnaC06g20450D
Coordinates
chrLK031817:-:816655..817932
Molecular Weight (calculated)
13100.9 Da
IEP (calculated)
4.724
GRAVY (calculated)
-0.324
Length
112 amino acids
Sequence
(BLAST)
001: MAEEVILLDY WSSMFGMRTR IALEEKGVKY EYREEDLSNK SPLLLEMNPI HMKIPVLIHK GKPICESIIQ VQYIDEVWPD ANPILPSDPY QRAQARFWSD
101: YIDKKDISLG SI
Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.