Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0015g02880.t01 | Wine grape | cytosol | 89.5 | 94.23 |
| VIT_19s0015g02890.t01 | Wine grape | cytosol | 93.15 | 93.15 |
| VIT_19s0015g02700.t01 | Wine grape | cytosol | 92.69 | 92.69 |
| VIT_19s0015g02730.t01 | Wine grape | cytosol | 92.24 | 92.24 |
| VIT_19s0093g00150.t01 | Wine grape | cytosol | 92.24 | 92.24 |
| VIT_19s0015g02590.t01 | Wine grape | cytosol | 87.67 | 91.87 |
| VIT_19s0093g00310.t01 | Wine grape | cytosol | 88.13 | 88.13 |
| VIT_19s0093g00190.t01 | Wine grape | cytosol | 85.84 | 85.84 |
| VIT_00s0240g00050.t01 | Wine grape | cytosol | 85.84 | 85.84 |
| VIT_19s0093g00220.t01 | Wine grape | cytosol | 88.58 | 85.46 |
| VIT_19s0015g02560.t01 | Wine grape | cytosol | 42.92 | 85.45 |
| VIT_19s0015g02680.t01 | Wine grape | cytosol | 85.39 | 85.39 |
| VIT_19s0093g00160.t01 | Wine grape | cytosol | 77.63 | 81.34 |
| VIT_19s0027g00460.t01 | Wine grape | cytosol | 82.19 | 80.72 |
| VIT_19s0015g02830.t01 | Wine grape | cytosol | 43.84 | 80.0 |
| VIT_00s0240g00020.t01 | Wine grape | cytosol | 42.01 | 77.97 |
| VIT_19s0093g00260.t01 | Wine grape | cytosol | 76.26 | 76.26 |
| CDX79258 | Canola | cytosol | 38.36 | 75.0 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 29.68 | 68.42 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 67.12 | 66.52 |
| PGSC0003DMT400054729 | Potato | cytosol | 66.67 | 66.06 |
| Solyc10g007640.2.1 | Tomato | cytosol | 66.67 | 66.06 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 65.75 | 65.16 |
| VIT_19s0015g02690.t01 | Wine grape | cytosol | 48.4 | 65.03 |
| Solyc12g011300.1.1 | Tomato | cytosol | 64.38 | 64.09 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 35.16 | 63.64 |
| Bra003647.1-P | Field mustard | cytosol | 62.56 | 62.27 |
| CDX68019 | Canola | cytosol | 62.56 | 62.27 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 62.56 | 61.99 |
| PGSC0003DMT400020286 | Potato | cytosol | 57.53 | 61.76 |
| AT1G78320.1 | Thale cress | cytosol | 61.64 | 61.36 |
| VIT_19s0015g02610.t01 | Wine grape | cytosol | 91.32 | 61.16 |
| PGSC0003DMT400092412 | Potato | cytosol | 60.73 | 60.73 |
| Solyc10g007620.1.1 | Tomato | cytosol | 59.36 | 59.36 |
| VIT_04s0079g00360.t01 | Wine grape | cytosol | 57.99 | 57.73 |
| VIT_19s0093g00290.t01 | Wine grape | mitochondrion | 32.42 | 55.47 |
| VIT_01s0026g01340.t01 | Wine grape | cytosol | 42.47 | 40.09 |
| VIT_01s0026g01330.t01 | Wine grape | cytosol | 41.55 | 39.22 |
| VIT_01s0026g01380.t01 | Wine grape | endoplasmic reticulum | 42.47 | 35.63 |
Protein Annotations
| Gene3D:1.20.1050.10 | EntrezGene:100250733 | wikigene:100250733 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | ProteinID:CCB57177 |
| ProteinID:CCB57177.1 | UniProt:F6HR69 | EMBL:FN596009 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 |
| InterPro:IPR010987 | EntrezGene:LOC100250733 | wikigene:LOC100250733 | PFAM:PF02798 | PFAM:PF13410 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00021082D0 | ArrayExpress:VIT_19s0093g00110 | EnsemblPlantsGene:VIT_19s0093g00110 | EnsemblPlants:VIT_19s0093g00110.t01 | RefSeq:XP_003634776 | RefSeq:XP_003634776.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:16531739..16532699
Molecular Weight (calculated)
25085.4 Da
IEP (calculated)
6.151
GRAVY (calculated)
-0.271
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEIILLDF SSSMFGMRVR VALAEKGLKY EYKGEDLWNK SPLLLEMNPV HKKIPVLIHN GKPICESLII VQYIDEVWKD KSPLLPSDPY QRAQARFWAD
101: YVDKKLAELG KKICSTKGEE QETAKKEFIE CLKLLEGELG EKPYFGGEKI GFVDVALVPF SCWFYAYESF GNFSIEAECP KLIAWTKRCM EKESVSSSLE
201: DPHKVHGYVV GIRKKYGIE
101: YVDKKLAELG KKICSTKGEE QETAKKEFIE CLKLLEGELG EKPYFGGEKI GFVDVALVPF SCWFYAYESF GNFSIEAECP KLIAWTKRCM EKESVSSSLE
201: DPHKVHGYVV GIRKKYGIE
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.