Factsheet for VIT_19s0093g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0026g01380.t01
VIT_06s0004g05670.t01
VIT_06s0004g05680.t01
VIT_06s0004g05700.t01
VIT_06s0004g05710.t01
VIT_10s0003g04250.t01
VIT_14s0060g02170.t01
VIT_19s0093g00320.t01
VIT_19s0093g00350.t01
VIT_19s0093g00370.t01
VIT_19s0093g00400.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	VIT_06s0004g05670.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05680.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05700.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_06s0004g05710.t01	AT2G29420.1	21798944
AT1G17180.1	VIT_14s0060g02170.t01	AT2G29420.1	21798944
AT1G17190.1	VIT_01s0026g01380.t01	AT1G10360.1	21798944
AT1G17190.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G17190.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G78340.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_10s0003g04250.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00320.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00350.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00370.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_19s0093g00400.t01	AT1G17190.1	21798944
AT1G78380.1	VIT_06s0004g05670.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05680.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05700.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_06s0004g05710.t01	AT2G29490.1	21798944
AT1G78380.1	VIT_14s0060g02170.t01	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g04250.t01	Wine grape	cytosol	55.37	70.53
VIT_19s0015g02560.t01	Wine grape	cytosol	59.5	65.45
VIT_00s0240g00020.t01	Wine grape	cytosol	59.5	61.02
VIT_19s0015g02830.t01	Wine grape	cytosol	58.68	59.17
VIT_19s0015g02690.t01	Wine grape	cytosol	65.29	48.47
VIT_19s0093g00400.t01	Wine grape	cytosol	73.55	40.27
VIT_19s0093g00350.t01	Wine grape	cytosol	73.55	40.27
VIT_19s0015g02880.t01	Wine grape	cytosol	64.46	37.5
VIT_19s0015g02590.t01	Wine grape	cytosol	64.46	37.32
VIT_19s0093g00320.t01	Wine grape	cytosol	66.94	36.65
VIT_19s0093g00310.t01	Wine grape	cytosol	65.29	36.07
VIT_19s0015g02700.t01	Wine grape	cytosol	64.46	35.62
KRH43843	Soybean	cytosol	63.64	35.16
VIT_19s0093g00150.t01	Wine grape	cytosol	63.64	35.16
VIT_19s0093g00110.t01	Wine grape	cytosol	63.64	35.16
VIT_19s0015g02890.t01	Wine grape	cytosol	63.64	35.16
VIT_19s0015g02730.t01	Wine grape	cytosol	63.64	35.16
CDX68018	Canola	cytosol	62.81	34.86
Bra003646.1-P	Field mustard	cytosol	62.81	34.86
CDX79259	Canola	cytosol	62.81	34.7
Solyc12g011310.1.1	Tomato	plastid	62.81	34.7
VIT_19s0027g00460.t01	Wine grape	cytosol	63.64	34.53
VIT_19s0093g00190.t01	Wine grape	cytosol	61.98	34.25
PGSC0003DMT400071059	Potato	cytosol	61.98	34.09
AT1G17170.1	Thale cress	cytosol	61.16	33.95
VIT_19s0093g00260.t01	Wine grape	cytosol	61.16	33.79
Solyc07g056490.2.1	Tomato	extracellular	61.16	33.79
VIT_19s0015g02680.t01	Wine grape	cytosol	61.16	33.79
KRH02498	Soybean	cytosol	60.33	33.49
VIT_19s0093g00220.t01	Wine grape	cytosol	62.81	33.48
PGSC0003DMT400038054	Potato	endoplasmic reticulum	60.33	33.33
AT1G78340.1	Thale cress	cytosol	59.5	33.03
Bra035029.1-P	Field mustard	cytosol	59.5	33.03
CDX68016	Canola	cytosol	59.5	32.88
CDX79261	Canola	cytosol	59.5	32.88
KRH13625	Soybean	cytosol	59.5	32.88
VIT_00s0240g00050.t01	Wine grape	cytosol	59.5	32.88
Bra003644.1-P	Field mustard	cytosol	59.5	32.88
CDX88439	Canola	cytosol	58.68	32.57
CDX88438	Canola	cytosol	58.68	32.57
Bra025995.1-P	Field mustard	cytosol	57.85	32.56
Bra025994.1-P	Field mustard	cytosol	58.68	32.42
CDX81809	Canola	cytosol	58.68	32.42
AT1G78380.1	Thale cress	cytosol	58.68	32.42
CDY26266	Canola	cytosol	58.68	32.42
CDY26861	Canola	cytosol	58.68	32.42
CDX81807	Canola	cytosol	57.85	32.11
CDY21758	Canola	cytosol	57.85	31.96
CDY48476	Canola	cytosol	57.85	31.96
Bra026680.1-P	Field mustard	cytosol	57.85	31.96
Bra026681.1-P	Field mustard	cytosol	57.85	31.96
Bra026684.1-P	Field mustard	cytosol	57.85	31.96
CDY14615	Canola	cytosol	57.85	31.96
AT1G17180.1	Thale cress	cytosol	57.85	31.67
CDY26267	Canola	cytosol	56.2	31.63
CDX81808	Canola	cytosol	57.02	31.51
Bra035031.1-P	Field mustard	cytosol	56.2	30.91
CDX87452	Canola	cytosol	56.2	30.91
AT1G17190.1	Thale cress	cytosol	56.2	30.91
AT3G43800.1	Thale cress	cytosol	57.85	30.84
CDY21757	Canola	cytosol	55.37	30.59
CDX88440	Canola	cytosol	55.37	30.45
KRH43845	Soybean	cytosol	55.37	30.18
CDY48475	Canola	cytosol	42.15	30.18
CDX81810	Canola	cytosol	54.55	30.14
Bra026679.1-P	Field mustard	cytosol	54.55	30.14
CDY21756	Canola	cytosol	54.55	30.14
CDX88441	Canola	cytosol	54.55	29.86
CDX83922	Canola	cytosol	53.72	29.68
CDX96787	Canola	cytosol	53.72	29.68
Bra016615.1-P	Field mustard	cytosol	53.72	29.68
AT1G78370.1	Thale cress	cytosol	52.89	29.49
CDX68017	Canola	cytosol	52.89	29.49
KRH43846	Soybean	cytosol	49.59	29.41
AT1G78360.1	Thale cress	endoplasmic reticulum	52.89	29.09
Bra034977.1-P	Field mustard	cytosol	54.55	29.07
CDY12324	Canola	cytosol	54.55	29.07
CDX87952	Canola	cytosol	54.55	29.07
CDX79260	Canola	cytosol	52.07	29.03
KRH13620	Soybean	cytosol	52.89	28.96
VIT_04s0079g00360.t01	Wine grape	cytosol	51.24	28.18
KRH13622	Soybean	cytosol	39.67	28.07
Bra003645.1-P	Field mustard	cytosol	47.11	27.94
Bra025993.1-P	Field mustard	cytosol	50.41	27.73
VIT_01s0026g01340.t01	Wine grape	cytosol	51.24	26.72
VIT_19s0093g00160.t01	Wine grape	cytosol	45.45	26.32
VIT_01s0026g01330.t01	Wine grape	cytosol	50.41	26.29
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	52.89	24.52
VIT_19s0015g02610.t01	Wine grape	cytosol	64.46	23.85
CDY48477	Canola	cytosol	36.36	23.04
Bra003648.1-P	Field mustard	cytosol	21.49	17.45
CDX68020	Canola	cytosol	1.65	5.56
VIT_19s0093g00290.t01	Wine grape	mitochondrion	5.79	5.47

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB57189	ProteinID:CCB57189.1	UniProt:F6HR81
EMBL:FN596009	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	PFAM:PF02798	PFscan:PS50404	PANTHER:PTHR11260	PANTHER:PTHR11260:SF493
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002108592	ArrayExpress:VIT_19s0093g00370	EnsemblPlantsGene:VIT_19s0093g00370	EnsemblPlants:VIT_19s0093g00370.t01

Description

No Description!

Coordinates

chr19:+:17114098..17114544

Molecular Weight (calculated)

13738.9 Da

IEP (calculated)

7.558

GRAVY (calculated)

-0.143

Length

121 amino acids

Sequence
(BLAST)

001: MANNDQIVVL DFLPSPYGMR VRLAFAAKGI EHEGKEEENL MEGKSSLLLQ MNPVHKKIPV LIHNGKPICE SLIIVEYIDG LWKDKFPLLP SDPYQRAQAK
101: FWAHFIDNKV KCIHCNAAIP T

Best Arabidopsis Sequence Match ( AT1G78340.1 )
(BLAST)

001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV

Arabidopsis Description

GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.