Factsheet for Bra003645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68017	Canola	cytosol	99.51	93.55
AT1G78370.1	Thale cress	cytosol	88.73	83.41
Bra003644.1-P	Field mustard	cytosol	69.12	64.38
Bra008357.1-P	Field mustard	cytosol	35.29	63.16
Bra026684.1-P	Field mustard	cytosol	65.69	61.19
Bra026681.1-P	Field mustard	cytosol	65.2	60.73
Bra003646.1-P	Field mustard	cytosol	64.71	60.55
Bra025994.1-P	Field mustard	cytosol	64.71	60.27
Solyc07g056490.2.1	Tomato	extracellular	64.22	59.82
PGSC0003DMT400038054	Potato	endoplasmic reticulum	64.22	59.82
Bra025995.1-P	Field mustard	cytosol	61.76	58.6
Bra035029.1-P	Field mustard	cytosol	62.25	58.26
Bra035031.1-P	Field mustard	cytosol	62.75	58.18
KRH13622	Soybean	cytosol	48.53	57.89
KRH43843	Soybean	cytosol	61.76	57.53
Bra026680.1-P	Field mustard	cytosol	61.27	57.08
Solyc12g011310.1.1	Tomato	plastid	61.27	57.08
Bra016615.1-P	Field mustard	cytosol	60.29	56.16
PGSC0003DMT400071059	Potato	cytosol	60.29	55.91
Bra003647.1-P	Field mustard	cytosol	59.8	55.45
KRH13625	Soybean	cytosol	59.31	55.25
KRH02498	Soybean	cytosol	58.82	55.05
Bra025993.1-P	Field mustard	cytosol	58.82	54.55
Bra038140.1-P	Field mustard	cytosol	59.8	54.46
VIT_19s0093g00350.t01	Wine grape	cytosol	58.82	54.3
KRH43845	Soybean	cytosol	58.82	54.05
Bra026679.1-P	Field mustard	cytosol	57.84	53.88
VIT_19s0093g00400.t01	Wine grape	cytosol	58.33	53.85
KRH13620	Soybean	cytosol	57.35	52.94
Bra003648.1-P	Field mustard	cytosol	38.24	52.35
KRH43846	Soybean	cytosol	48.53	48.53
VIT_19s0093g00320.t01	Wine grape	cytosol	51.96	47.96
VIT_19s0093g00370.t01	Wine grape	cytosol	27.94	47.11
VIT_10s0003g04250.t01	Wine grape	cytosol	21.57	46.32
Bra034977.1-P	Field mustard	cytosol	50.0	44.93
Bra024659.1-P	Field mustard	cytosol	44.12	39.65
Bra007889.1-P	Field mustard	mitochondrion	39.22	38.46
Bra031708.1-P	Field mustard	cytosol	42.65	38.33
Bra016252.1-P	Field mustard	cytosol	42.16	37.39
Bra027840.1-P	Field mustard	cytosol	42.16	36.75
Bra019940.1-P	Field mustard	cytosol	40.69	36.56
Bra016253.1-P	Field mustard	cytosol	38.24	34.21
Bra012422.1-P	Field mustard	cytosol	31.86	32.83
Bra007890.1-P	Field mustard	cytosol	36.76	32.61
Bra016250.1-P	Field mustard	cytosol	36.76	32.05
Bra003970.1-P	Field mustard	cytosol	36.27	31.62
Bra027842.1-P	Field mustard	cytosol	20.1	26.62

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	MapMan:9.5.1.5.3	EnsemblPlantsGene:Bra003645	EnsemblPlants:Bra003645.1
EnsemblPlants:Bra003645.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009719
GO:GO:0009735	GO:GO:0016740	GO:GO:0019899	GO:GO:0048046	GO:GO:2000030	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4CHG2	PFAM:PF13410
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002541457	:	:	:

Description

AT1G78370 (E=2e-106) ATGSTU20 | ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20); glutathione transferase

Coordinates

chrA07:+:14219046..14219969

Molecular Weight (calculated)

23281.8 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.359

Length

204 amino acids

Sequence
(BLAST)

001: MFCMRARVAL REKGVVFEAR EEDLTNKSPL LLRSNPIHKK VPVLIHNGKP ICESLNVVQY VDEAWSDKNP FFPSDPYGKA QARFWADFVD KKFSDAQFKI
101: WGKKGEEQAA GVKEFIEAVK ILEAELGDKP YFGGDSFGYV DIALITFYSW FGAYEKFGNF SIEAESPKLI AWAKRCMEKE SVSKSLPDQE KIVAYAAEFR
201: KNNL

Best Arabidopsis Sequence Match ( AT1G78370.1 )
(BLAST)

001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL

Arabidopsis Description

GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.