Factsheet for Bra035029.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018385.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78340.1	Bra018385.1-P	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88439	Canola	cytosol	98.62	98.62
CDX88438	Canola	cytosol	98.62	98.62
Bra003646.1-P	Field mustard	cytosol	83.49	83.49
AT1G78340.1	Thale cress	cytosol	82.57	82.57
Bra003644.1-P	Field mustard	cytosol	70.64	70.32
Bra003648.1-P	Field mustard	cytosol	47.71	69.8
Bra025994.1-P	Field mustard	cytosol	65.6	65.3
Bra026681.1-P	Field mustard	cytosol	64.68	64.38
Bra026684.1-P	Field mustard	cytosol	64.68	64.38
Bra003645.1-P	Field mustard	cytosol	58.26	62.25
Bra035031.1-P	Field mustard	cytosol	62.39	61.82
Bra025995.1-P	Field mustard	cytosol	60.55	61.4
Bra026680.1-P	Field mustard	cytosol	61.47	61.19
Bra003647.1-P	Field mustard	cytosol	61.47	60.91
VIT_19s0093g00370.t01	Wine grape	cytosol	33.03	59.5
Bra016615.1-P	Field mustard	cytosol	59.63	59.36
KRH43843	Soybean	cytosol	59.63	59.36
Bra026679.1-P	Field mustard	cytosol	59.17	58.9
Bra025993.1-P	Field mustard	cytosol	59.17	58.64
Solyc07g056490.2.1	Tomato	extracellular	58.72	58.45
PGSC0003DMT400071059	Potato	cytosol	58.72	58.18
PGSC0003DMT400038054	Potato	endoplasmic reticulum	57.8	57.53
KRH13622	Soybean	cytosol	44.95	57.31
Solyc12g011310.1.1	Tomato	plastid	57.34	57.08
KRH43845	Soybean	cytosol	57.34	56.31
VIT_10s0003g04250.t01	Wine grape	cytosol	24.31	55.79
KRH13625	Soybean	cytosol	55.96	55.71
Bra038140.1-P	Field mustard	cytosol	56.88	55.36
KRH02498	Soybean	cytosol	55.05	55.05
VIT_19s0093g00320.t01	Wine grape	cytosol	54.13	53.39
VIT_19s0093g00350.t01	Wine grape	cytosol	54.13	53.39
Bra008357.1-P	Field mustard	cytosol	27.52	52.63
VIT_19s0093g00400.t01	Wine grape	cytosol	52.75	52.04
KRH13620	Soybean	cytosol	50.92	50.23
KRH43846	Soybean	cytosol	44.95	48.04
Bra034977.1-P	Field mustard	cytosol	49.08	47.14
Bra031708.1-P	Field mustard	cytosol	41.74	40.09
Bra007889.1-P	Field mustard	mitochondrion	38.07	39.9
Bra019940.1-P	Field mustard	cytosol	40.83	39.21
Bra024659.1-P	Field mustard	cytosol	39.91	38.33
Bra027840.1-P	Field mustard	cytosol	40.37	37.61
Bra016252.1-P	Field mustard	cytosol	39.45	37.39
Bra016253.1-P	Field mustard	cytosol	38.07	36.4
Bra012422.1-P	Field mustard	cytosol	33.03	36.36
Bra007890.1-P	Field mustard	cytosol	36.7	34.78
Bra016250.1-P	Field mustard	cytosol	37.16	34.62
Bra003970.1-P	Field mustard	cytosol	36.24	33.76
Bra027842.1-P	Field mustard	cytosol	19.27	27.27

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra035029	EnsemblPlants:Bra035029.1	EnsemblPlants:Bra035029.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4F1T2	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002541BF2	:	:	:	:	:

Description

AT1G78340 (E=2e-104) ATGSTU22 | ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase

Coordinates

chrA07:-:21852450..21853601

Molecular Weight (calculated)

24926.9 Da

IEP (calculated)

4.890

GRAVY (calculated)

-0.300

Length

218 amino acids

Sequence
(BLAST)

001: MADEVILLDY WASPFGMRAR IALREKGVKF ECREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNA VQYIDEVWSG KNSILPSDPY QRAQARFWID
101: FIDTKVYEPA DKIWSTTGEV QETAKKDFIE ALKILEAELG DKPYFGGDNF GLVDIAMTGY YSWFEPFEKC ANFSIESECP TLMASAKRCL QRESVVNSIP
201: NPDELFALAL KLRKEYGV

Best Arabidopsis Sequence Match ( AT1G78340.1 )
(BLAST)

001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV

Arabidopsis Description

GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.