Factsheet for Bra026679.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra039980.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	Bra039980.1-P	AT2G29420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21756	Canola	cytosol	98.17	98.17
Bra026680.1-P	Field mustard	cytosol	87.67	87.67
Bra026684.1-P	Field mustard	cytosol	79.91	79.91
Bra026681.1-P	Field mustard	cytosol	79.45	79.45
Bra025994.1-P	Field mustard	cytosol	77.63	77.63
AT1G17180.1	Thale cress	cytosol	76.26	75.57
Bra025995.1-P	Field mustard	cytosol	67.12	68.37
Bra003644.1-P	Field mustard	cytosol	68.04	68.04
Bra008357.1-P	Field mustard	cytosol	33.33	64.04
Bra003646.1-P	Field mustard	cytosol	62.1	62.39
Bra035031.1-P	Field mustard	cytosol	62.56	62.27
Bra003647.1-P	Field mustard	cytosol	61.64	61.36
Bra016615.1-P	Field mustard	cytosol	60.73	60.73
Solyc12g011310.1.1	Tomato	plastid	59.36	59.36
Bra035029.1-P	Field mustard	cytosol	58.9	59.17
Bra025993.1-P	Field mustard	cytosol	59.36	59.09
Bra038140.1-P	Field mustard	cytosol	60.27	58.93
Bra003645.1-P	Field mustard	cytosol	53.88	57.84
KRH13622	Soybean	cytosol	44.75	57.31
Solyc07g056490.2.1	Tomato	extracellular	57.08	57.08
PGSC0003DMT400038054	Potato	endoplasmic reticulum	56.62	56.62
PGSC0003DMT400071059	Potato	cytosol	56.16	55.91
KRH43843	Soybean	cytosol	55.71	55.71
VIT_19s0093g00400.t01	Wine grape	cytosol	56.16	55.66
VIT_19s0093g00350.t01	Wine grape	cytosol	55.71	55.2
VIT_10s0003g04250.t01	Wine grape	cytosol	23.74	54.74
KRH02498	Soybean	cytosol	54.34	54.59
VIT_19s0093g00370.t01	Wine grape	cytosol	30.14	54.55
VIT_19s0093g00320.t01	Wine grape	cytosol	54.79	54.3
KRH13620	Soybean	cytosol	54.79	54.3
KRH43845	Soybean	cytosol	54.79	54.05
KRH13625	Soybean	cytosol	53.42	53.42
KRH43846	Soybean	cytosol	48.86	52.45
Bra003648.1-P	Field mustard	cytosol	34.25	50.34
Bra034977.1-P	Field mustard	cytosol	51.14	49.34
Bra027840.1-P	Field mustard	cytosol	41.1	38.46
Bra031708.1-P	Field mustard	cytosol	37.44	36.12
Bra019940.1-P	Field mustard	cytosol	36.53	35.24
Bra007889.1-P	Field mustard	mitochondrion	33.33	35.1
Bra007890.1-P	Field mustard	cytosol	36.53	34.78
Bra016250.1-P	Field mustard	cytosol	36.99	34.62
Bra003970.1-P	Field mustard	cytosol	36.99	34.62
Bra024659.1-P	Field mustard	cytosol	34.7	33.48
Bra016253.1-P	Field mustard	cytosol	34.7	33.33
Bra016252.1-P	Field mustard	cytosol	34.7	33.04
Bra012422.1-P	Field mustard	cytosol	26.48	29.29
Bra027842.1-P	Field mustard	cytosol	19.63	27.92

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra026679	EnsemblPlants:Bra026679.1	EnsemblPlants:Bra026679.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4ED19	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002542BBE	SEG:seg	:	:	:	:

Description

AT1G17180 (E=2e-096) ATGSTU25 | ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase

Coordinates

chrA09:-:33183230..33183970

Molecular Weight (calculated)

25264.5 Da

IEP (calculated)

4.834

GRAVY (calculated)

-0.325

Length

219 amino acids

Sequence
(BLAST)

001: MVDEVILLDY WPSLFGVRTR IALEEKNIKF DYIEQDLCNK SALLLEMNPV HKKIPVLIHN GKPVCESLIQ VEFIDETWPK ANPLLPSDPY QRAQARFWGN
101: FIDQMLPGLG KLMWGANGEE QEEGKKEFVE MLKTVESELG DRTYFGGETF GYVDIALIGY YCWFDAFEKY GNFSIEAECP KIIAWAKRCV KRDSVAKSLP
201: DSEKVTELVP ELKKKKRVE

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.