Factsheet for Bra039980.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003644.1-P
Bra016615.1-P
Bra018385.1-P
Bra025993.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29420.1	Bra016615.1-P	AT1G17190.1	21798944
AT2G29420.1	Bra025993.1-P	AT1G17190.1	21798944
AT2G29420.1	Bra003644.1-P	AT1G78380.1	21798944
AT2G29420.1	Bra018385.1-P	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51369	Canola	cytosol	98.67	98.67
CDX97887	Canola	cytosol	96.0	96.0
AT2G29420.1	Thale cress	cytosol	85.33	84.58
VIT_06s0004g05710.t01	Wine grape	cytosol	24.89	71.79
VIT_06s0004g05680.t01	Wine grape	cytosol	34.67	71.56
Bra039982.1-P	Field mustard	cytosol	52.89	53.12
Bra039984.1-P	Field mustard	cytosol	52.0	52.7
Bra000474.1-P	Field mustard	cytosol	52.44	52.68
Bra018386.1-P	Field mustard	cytosol	52.44	52.68
VIT_06s0004g05700.t01	Wine grape	cytosol	50.22	51.36
VIT_14s0060g02170.t01	Wine grape	cytosol	47.11	45.89
Bra039983.1-P	Field mustard	cytosol	46.22	45.61
Bra034061.1-P	Field mustard	cytosol	45.33	45.13
Bra018385.1-P	Field mustard	cytosol	36.89	43.68
Bra010088.1-P	Field mustard	cytosol	43.56	41.88
Bra008157.1-P	Field mustard	cytosol	38.22	37.07
Bra015901.1-P	Field mustard	cytosol	35.56	34.48
VIT_06s0004g05670.t01	Wine grape	cytosol	53.78	34.38

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra039980	EnsemblPlants:Bra039980.1	EnsemblPlants:Bra039980.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009719	GO:GO:0009751	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4FFV6
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002544407	SEG:seg	:

Description

AT2G29420 (E=3e-096) ATGSTU7, GST25 | ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase

Coordinates

chrA04:-:13212257..13213006

Molecular Weight (calculated)

25742.5 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.037

Length

225 amino acids

Sequence
(BLAST)

001: MVERSEEVKL LGMWASPFSR RVEIALTLKG VPYEFSEQDI TNKSPLLLQS NPVHKMIPVL LHNGKPISES LVILEYIDDT WQNNPILPQD PYDRAIARFW
101: ARFLDEQVYV TAMKVVGKVG EEKDAAVEAT RDLLKLLEKE LVGKDFLGGE SLGFVDIVAT LVAFWLMRTE EVVGVKVVPV EMFPEIHRWV KNLLDVDVIK
201: KCIPPEDEHL DYIRARMESL KLKSV

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.