Factsheet for Bra018385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003644.1-P
Bra025994.1-P
Bra026679.1-P
Bra026680.1-P
Bra026681.1-P
Bra026684.1-P
Bra033157.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29490.1	Bra025994.1-P	AT1G17180.1	21798944
AT2G29490.1	Bra026679.1-P	AT1G17180.1	21798944
AT2G29490.1	Bra026680.1-P	AT1G17180.1	21798944
AT2G29490.1	Bra026681.1-P	AT1G17180.1	21798944
AT2G29490.1	Bra026684.1-P	AT1G17180.1	21798944
AT2G29490.1	Bra003644.1-P	AT1G78380.1	21798944
AT2G29490.1	Bra033157.1-P	AT4G11100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45446	Canola	cytosol	85.26	72.32
CDY53373	Canola	cytosol	82.11	69.64
Bra039982.1-P	Field mustard	cytosol	67.37	57.14
AT2G29490.1	Thale cress	cytosol	66.84	56.7
Bra039984.1-P	Field mustard	cytosol	61.05	52.25
Bra039983.1-P	Field mustard	cytosol	61.58	51.32
VIT_06s0004g05710.t01	Wine grape	cytosol	19.47	47.44
Bra000474.1-P	Field mustard	cytosol	55.26	46.88
Bra018386.1-P	Field mustard	cytosol	54.21	45.98
VIT_06s0004g05680.t01	Wine grape	cytosol	23.16	40.37
Bra039980.1-P	Field mustard	cytosol	43.68	36.89
Bra034061.1-P	Field mustard	cytosol	38.95	32.74
VIT_06s0004g05700.t01	Wine grape	cytosol	36.32	31.36
VIT_14s0060g02170.t01	Wine grape	cytosol	36.32	29.87
Bra008157.1-P	Field mustard	cytosol	33.16	27.16
Bra015901.1-P	Field mustard	cytosol	30.53	25.0
Bra010088.1-P	Field mustard	cytosol	27.89	22.65
VIT_06s0004g05670.t01	Wine grape	cytosol	40.0	21.59

Protein Annotations

Gene3D:1.20.1050.10	Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra018385	EnsemblPlants:Bra018385.1	EnsemblPlants:Bra018385.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4DPE4	PFAM:PF13410	PFAM:PF13417
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0002547D64	SEG:seg	:	:	:

Description

AT2G29460 (E=1e-038) ATGSTU4, GST22 | ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4); glutathione transferase

Coordinates

chrA05:+:7865113..7865879

Molecular Weight (calculated)

22129.9 Da

IEP (calculated)

9.207

GRAVY (calculated)

-0.541

Length

190 amino acids

Sequence
(BLAST)

001: MTENEGKVKL LGCWASPFSR RVEMALKRKG IPYEYLEEAL PNKSPLLLEL NPFTRRSLRE SHGSILGKIH RRADSYCRIQ VSSKSREGER GRIEEAREKF
101: AFLEKEVTGK DFFGGKTIGF VDMVAGSIIP FCLARLWEGM RIDVIPEDEF PELNRWIKNL KDIESVRECI PHREKQIEHM MKVSERYKLA

Best Arabidopsis Sequence Match ( AT2G29450.1 )
(BLAST)

001: MAEKEEVKLL GIWASPFSRR VEMALKLKGI PYEYVEEILE NKSPLLLALN PIHKKVPVLV HNGKTILESH VILEYIDETW PQNPILPQDP YERSKARFFA
101: KLVDEQIMNV GFISMARADE KGREVLAEQV RELIMYLEKE LVGKDYFGGK TVGFLDFVAG SLIPFCLERG WEGIGLEVIT EEKFPEFKRW VRNLEKVEIV
201: KDCVPPREEH VEHMNYMAER VRSS

Arabidopsis Description

GSTU5GSTU5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.