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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05670.t01
VIT_06s0004g05680.t01
VIT_06s0004g05700.t01
VIT_06s0004g05710.t01
VIT_10s0003g04250.t01
VIT_14s0060g02170.t01
VIT_18s0122g00510.t01
VIT_19s0093g00320.t01
VIT_19s0093g00350.t01
VIT_19s0093g00370.t01
VIT_19s0093g00400.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G29420.1 VIT_10s0003g04250.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00320.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00350.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00370.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00400.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_10s0003g04250.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00320.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00350.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00370.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00400.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_06s0004g05670.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05680.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05700.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05710.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_14s0060g02170.t01 AT2G29490.1 21798944
AT2G29480.1 VIT_18s0122g00510.t01 AT1G20950.1 21798944
AT2G29490.1 VIT_10s0003g04250.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00320.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00350.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00370.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00400.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_10s0003g04250.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00320.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00350.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00370.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00400.t01 AT1G78380.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g05710.t01 Wine grape cytosol 27.73 78.21
VIT_06s0004g05680.t01 Wine grape cytosol 38.64 77.98
VIT_17s0000g06120.t01 Wine grape cytosol 31.82 63.64
VIT_08s0007g01410.t01 Wine grape cytosol 61.82 61.54
VIT_14s0060g02170.t01 Wine grape cytosol 62.27 59.31
VIT_08s0007g01400.t01 Wine grape cytosol 59.55 59.28
VIT_08s0007g01420.t01 Wine grape cytosol 58.18 58.72
VIT_15s0024g01630.t01 Wine grape cytosol 52.27 54.25
VIT_00s0153g00050.t01 Wine grape endoplasmic reticulum 52.27 51.11
CDX97887 Canola cytosol 52.27 51.11
VIT_05s0051g00130.t01 Wine grape endoplasmic reticulum 46.36 51.0
CDY51369 Canola cytosol 51.82 50.67
VIT_15s0024g01650.t01 Wine grape cytosol 51.36 50.22
Bra039980.1-P Field mustard cytosol 51.36 50.22
VIT_17s0000g02920.t01 Wine grape extracellular 50.0 49.77
Bra039984.1-P Field mustard cytosol 50.0 49.55
AT2G29420.1 Thale cress cytosol 50.91 49.34
CDY51364 Canola cytosol 50.0 49.11
VIT_17s0000g02930.t01 Wine grape cytosol 50.0 48.89
CDY51366 Canola cytosol 49.55 48.66
CDX97882 Canola cytosol 49.55 48.66
CDY40167 Canola cytosol 49.55 48.66
Bra018386.1-P Field mustard cytosol 49.55 48.66
VIT_15s0024g01540.t01 Wine grape cytosol 50.0 48.25
CDY45445 Canola cytosol 49.09 48.21
CDY53373 Canola cytosol 49.09 48.21
VIT_17s0000g02950.t01 Wine grape cytosol 49.09 48.0
Bra000474.1-P Field mustard cytosol 48.64 47.77
CDX97884 Canola cytosol 48.64 47.77
CDX83309 Canola cytosol 48.64 47.77
AT2G29450.1 Thale cress cytosol 48.64 47.77
Bra039982.1-P Field mustard cytosol 48.64 47.77
VIT_00s0153g00070.t01 Wine grape cytosol 50.0 47.62
VIT_06s0004g05670.t01 Wine grape cytosol 75.91 47.44
CDY72138 Canola cytosol 48.18 47.32
AT2G29460.1 Thale cress cytosol 48.18 47.32
AT2G29490.1 Thale cress cytosol 48.18 47.32
AT2G29480.1 Thale cress cytosol 48.18 47.11
AT2G29440.1 Thale cress cytosol 47.73 47.09
VIT_05s0051g00180.t01 Wine grape endoplasmic reticulum 46.82 47.03
CDY45446 Canola cytosol 47.73 46.88
AT2G29470.1 Thale cress cytosol 47.27 46.22
VIT_05s0051g00110.t01 Wine grape cytosol 46.82 45.98
VIT_08s0040g00920.t01 Wine grape cytosol 47.27 45.81
VIT_01s0026g02400.t01 Wine grape cytosol 47.27 45.81
VIT_17s0000g02940.t01 Wine grape cytosol 36.82 45.76
VIT_07s0005g04890.t01 Wine grape cytosol 46.36 45.74
VIT_01s0026g02390.t01 Wine grape cytosol 47.27 45.61
VIT_07s0005g04880.t01 Wine grape cytosol 45.91 45.5
CDX97883 Canola cytosol 46.36 44.74
VIT_01s0026g02370.t01 Wine grape cytosol 46.36 44.74
VIT_07s0005g04870.t01 Wine grape cytosol 45.45 44.05
VIT_17s0000g06130.t01 Wine grape cytosol 45.45 44.05
CDY51365 Canola cytosol 45.0 43.42
Bra039983.1-P Field mustard cytosol 45.0 43.42
VIT_16s0039g01070.t01 Wine grape cytosol 45.91 42.8
VIT_17s0000g06110.t01 Wine grape cytosol 45.91 42.8
VIT_16s0039g00970.t01 Wine grape cytosol 45.45 42.37
VIT_16s0039g00990.t01 Wine grape cytosol 45.45 42.37
VIT_05s0049g01090.t01 Wine grape endoplasmic reticulum 43.64 42.29
VIT_05s0049g01120.t01 Wine grape endoplasmic reticulum 43.64 42.29
VIT_18s0001g07010.t01 Wine grape cytosol 33.18 41.95
VIT_05s0049g01070.t01 Wine grape cytosol, endoplasmic reticulum 43.18 41.85
VIT_05s0049g01100.t01 Wine grape endoplasmic reticulum 43.18 41.85
VIT_17s0000g06140.t01 Wine grape cytosol 43.18 41.13
VIT_05s0049g01080.t01 Wine grape cytosol, endoplasmic reticulum 42.27 38.91
CDY18883 Canola cytosol, extracellular 28.64 37.5
Bra018385.1-P Field mustard cytosol 31.36 36.32
VIT_18s0072g00320.t01 Wine grape cytosol 45.45 35.71
VIT_15s0107g00150.t01 Wine grape endoplasmic reticulum, plastid 43.64 35.56
CDY01992 Canola cytosol, vacuole 15.45 27.2
VIT_17s0000g06150.t01 Wine grape cytosol, plastid 18.18 23.67
Protein Annotations
Gene3D:1.20.1050.10EntrezGene:100244980wikigene:100244980MapMan:18.8.1.4Gene3D:3.40.30.10ProteinID:CCB43523
ProteinID:CCB43523.1ncoils:CoilUniProt:F6GUW5EMBL:FN594951GO:GO:0003674GO:GO:0003824
GO:GO:0004364GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006749GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407
GO:GO:0009987GO:GO:0016740GO:GO:0019748InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987EntrezGene:LOC100244980wikigene:LOC100244980PFAM:PF00043
PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF486SUPFAM:SSF47616
SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI00015C7EDFArrayExpress:VIT_06s0004g05700EnsemblPlantsGene:VIT_06s0004g05700EnsemblPlants:VIT_06s0004g05700.t01
RefSeq:XP_002280198RefSeq:XP_002280198.2RefSeq:XP_010650966.1SEG:seg::
Description
No Description!
Coordinates
chr6:+:6493056..6494136
Molecular Weight (calculated)
25502.9 Da
IEP (calculated)
7.747
GRAVY (calculated)
-0.330
Length
220 amino acids
Sequence
(BLAST)
001: MAEEVKLFGA WGSPYSRRIE LALKLKGLQF EYIEENLYNK SPALLKYNPV HKKVPVLVHN GKPVAESLVI LEYIDETWKH NPFLPTDPYE KAKARFWARF
101: IDEKFWPAAK KAMASRGRER EEAIEEAQQH LKTLESELKE KKIFGRESLG FVDIAAHLLF WLVVAQEAFG VEILTEEKFP AVHELYQRLA DEAVFKECMP
201: PKEQLIAYLK VRLGAWTASK
Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)
001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA
Arabidopsis Description
GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.