Factsheet for VIT_17s0000g06120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05710.t01	Wine grape	cytosol	48.18	67.95
VIT_06s0004g05680.t01	Wine grape	cytosol	64.55	65.14
Solyc08g062570.1.1	Tomato	cytosol	70.0	55.8
VIT_17s0000g06130.t01	Wine grape	cytosol	80.0	38.77
VIT_17s0000g06110.t01	Wine grape	cytosol	78.18	36.44
VIT_17s0000g06140.t01	Wine grape	cytosol	75.45	35.93
KRH54548	Soybean	cytosol	72.73	34.04
PGSC0003DMT400051375	Potato	cytosol	70.0	33.77
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	60.91	33.5
Solyc03g116120.1.1	Tomato	cytosol	67.27	33.04
CDY00291	Canola	cytosol	70.0	32.91
VIT_16s0039g00970.t01	Wine grape	cytosol	70.0	32.63
VIT_01s0026g02400.t01	Wine grape	cytosol	67.27	32.6
CDX86895	Canola	cytosol	69.09	32.48
VIT_05s0051g00110.t01	Wine grape	cytosol	65.45	32.14
VIT_08s0007g01410.t01	Wine grape	cytosol	64.55	32.13
VIT_08s0007g01420.t01	Wine grape	cytosol	63.64	32.11
Bra010088.1-P	Field mustard	cytosol	68.18	32.05
VIT_06s0004g05700.t01	Wine grape	cytosol	63.64	31.82
VIT_16s0039g00990.t01	Wine grape	cytosol	68.18	31.78
VIT_08s0007g01400.t01	Wine grape	cytosol	63.64	31.67
VIT_01s0026g02370.t01	Wine grape	cytosol	65.45	31.58
VIT_01s0026g02390.t01	Wine grape	cytosol	64.55	31.14
VIT_15s0024g01630.t01	Wine grape	cytosol	60.0	31.13
VIT_16s0039g01070.t01	Wine grape	cytosol	66.36	30.93
GSMUA_Achr5P11960_001	Banana	cytosol	58.18	30.77
Solyc03g116130.1.1	Tomato	cytosol	64.55	30.47
VIT_17s0000g02920.t01	Wine grape	extracellular	60.91	30.32
Solyc12g062730.1.1	Tomato	cytosol	55.45	30.2
VIT_07s0005g04890.t01	Wine grape	cytosol	60.91	30.04
PGSC0003DMT400050289	Potato	cytosol	63.64	30.04
AT5G62480.1	Thale cress	cytosol	65.45	30.0
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	59.09	29.68
VIT_08s0040g00920.t01	Wine grape	cytosol	60.91	29.52
GSMUA_Achr2P03090_001	Banana	extracellular	61.82	29.44
VIT_15s0024g01540.t01	Wine grape	cytosol	60.91	29.39
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	60.0	29.33
VIT_15s0024g01650.t01	Wine grape	cytosol	59.09	28.89
VIT_17s0000g02930.t01	Wine grape	cytosol	58.18	28.44
VIT_17s0000g02950.t01	Wine grape	cytosol	58.18	28.44
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	58.18	28.19
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	58.18	28.19
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	57.27	27.75
VIT_07s0005g04870.t01	Wine grape	cytosol	57.27	27.75
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	57.27	27.75
VIT_00s0153g00070.t01	Wine grape	cytosol	58.18	27.71
VIT_14s0060g02170.t01	Wine grape	cytosol	57.27	27.27
VIT_07s0005g04880.t01	Wine grape	cytosol	54.55	27.03
GSMUA_Achr1P00010_001	Banana	cytosol	54.55	25.97
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	56.36	25.94
Solyc07g021460.1.1	Tomato	cytosol	39.09	23.24
VIT_17s0000g02940.t01	Wine grape	cytosol	37.27	23.16
EES19527	Sorghum	cytosol	53.64	22.52
VIT_18s0072g00320.t01	Wine grape	cytosol	57.27	22.5
Zm00001d038192_P001	Maize	cytosol, mitochondrion	53.64	22.1
VIT_18s0001g07010.t01	Wine grape	cytosol	34.55	21.84
Os05t0412800-01	Rice	cytosol	53.64	21.53
TraesCS1B01G269100.1	Wheat	cytosol	51.82	20.8
TraesCS1A01G258500.1	Wheat	cytosol	51.82	20.8
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	50.91	20.74
TraesCS1D01G257800.1	Wheat	cytosol	51.82	20.65
VIT_06s0004g05670.t01	Wine grape	cytosol	60.91	19.03
HORVU1Hr1G064890.1	Barley	cytosol	51.82	16.47
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	18.18	11.83
PGSC0003DMT400006306	Potato	cytosol	1.82	1.61

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100265722	wikigene:100265722	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:AM447531
ProteinID:CAN72033	ProteinID:CAN72033.1	ProteinID:CCB43094	ProteinID:CCB43094.1	UniProt:F6GT85	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	EntrezGene:LOC100265722	wikigene:LOC100265722	PFAM:PF02798	PFscan:PS50404	PANTHER:PTHR11260
PANTHER:PTHR11260:SF490	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001985153	ArrayExpress:VIT_17s0000g06120	EnsemblPlantsGene:VIT_17s0000g06120
EnsemblPlants:VIT_17s0000g06120.t01	RefSeq:XP_002269072	RefSeq:XP_002269072.1	:	:	:

Description

No Description!

Coordinates

chr17:+:6681951..6682289

Molecular Weight (calculated)

12978.9 Da

IEP (calculated)

9.792

GRAVY (calculated)

-0.505

Length

110 amino acids

Sequence
(BLAST)

001: MAEENQVKLH GIWASPYVKR VEMALKLEGI PYEYVEEDLR NKSQLLLQYN PVHKKVPVLI HNGKPIAESL IILEYIDKTW KNGPPLLPQD HYKRAKVRFW
101: ASFVQQEVRK

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.