Factsheet for PGSC0003DMT400051375

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g062730.1.1	Tomato	cytosol	79.39	89.6
PGSC0003DMT400006306	Potato	cytosol	48.25	88.71
Solyc07g021460.1.1	Tomato	cytosol	71.05	87.57
Solyc08g062570.1.1	Tomato	cytosol	45.18	74.64
VIT_17s0000g06120.t01	Wine grape	cytosol	33.77	70.0
PGSC0003DMT400050289	Potato	cytosol	57.46	56.22
VIT_17s0000g06130.t01	Wine grape	cytosol	55.26	55.51
PGSC0003DMT400005534	Potato	cytosol	24.56	55.45
VIT_17s0000g06140.t01	Wine grape	cytosol	54.39	53.68
VIT_17s0000g06110.t01	Wine grape	cytosol	54.39	52.54
KRH54548	Soybean	cytosol	53.07	51.49
CDX86895	Canola	cytosol	46.93	45.73
CDY00291	Canola	cytosol	46.49	45.3
Bra010088.1-P	Field mustard	cytosol	45.61	44.44
PGSC0003DMT400004531	Potato	cytosol	43.86	44.44
GSMUA_Achr5P11960_001	Banana	cytosol	39.91	43.75
AT5G62480.1	Thale cress	cytosol	45.61	43.33
PGSC0003DMT400005561	Potato	cytosol	33.33	42.94
PGSC0003DMT400005542	Potato	cytosol	40.79	42.86
PGSC0003DMT400005547	Potato	cytosol	40.79	42.86
PGSC0003DMT400005546	Potato	cytosol	40.79	42.66
GSMUA_Achr2P03090_001	Banana	extracellular	42.54	41.99
PGSC0003DMT400005572	Potato	cytosol	40.35	40.89
PGSC0003DMT400005549	Potato	cytosol	38.16	40.47
PGSC0003DMT400004540	Potato	cytosol	39.91	40.44
PGSC0003DMT400064983	Potato	cytosol	39.47	40.18
PGSC0003DMT400005544	Potato	cytosol	38.16	40.09
PGSC0003DMT400005552	Potato	cytosol	38.6	40.0
PGSC0003DMT400005551	Potato	mitochondrion	38.16	39.91
PGSC0003DMT400005571	Potato	cytosol	39.47	39.82
PGSC0003DMT400005538	Potato	cytosol	35.53	39.32
PGSC0003DMT400005536	Potato	cytosol	37.28	39.17
PGSC0003DMT400028619	Potato	cytosol	37.72	38.91
PGSC0003DMT400005557	Potato	cytosol	37.28	38.81
PGSC0003DMT400051271	Potato	cytosol	38.6	38.77
PGSC0003DMT400005532	Potato	cytosol	37.72	38.74
PGSC0003DMT400074054	Potato	cytosol	38.16	38.5
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.72	38.22
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	28.07	37.87
GSMUA_Achr1P00010_001	Banana	cytosol	37.72	37.23
PGSC0003DMT400063686	Potato	cytosol	36.4	37.05
PGSC0003DMT400094155	Potato	cytosol	35.09	35.87
PGSC0003DMT400030631	Potato	cytosol	36.4	35.78
PGSC0003DMT400022251	Potato	cytosol	28.07	34.41
EES19527	Sorghum	cytosol	34.65	30.15
Zm00001d038192_P001	Maize	cytosol, mitochondrion	35.09	29.96
Os05t0412800-01	Rice	cytosol	35.96	29.93
TraesCS1B01G269100.1	Wheat	cytosol	35.53	29.56
TraesCS1A01G258500.1	Wheat	cytosol	35.53	29.56
TraesCS1D01G257800.1	Wheat	cytosol	35.09	28.99
PGSC0003DMT400011275	Potato	cytosol	20.18	28.57
HORVU1Hr1G064890.1	Barley	cytosol	35.53	23.41

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1BRM9
PFAM:PF13417	EnsemblPlantsGene:PGSC0003DMG400019956	PGSC:PGSC0003DMG400019956	EnsemblPlants:PGSC0003DMT400051375	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000294BAA3

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400019956]

Coordinates

chr12:-:47549031..47550979

Molecular Weight (calculated)

26198.9 Da

IEP (calculated)

6.040

GRAVY (calculated)

-0.184

Length

228 amino acids

Sequence
(BLAST)

001: MEEENRVTLH GMWASPYAKR VELALKVKGI PYEYVEEDLM NKSALLLKYN PINKKVPILV HNGNPICESS VILEYIDETW KNESPLFPQD PYQRAKIRFW
101: ASYIHQVYDC MLKVFRGEEQ DKALEEFYAK LSVLEDGINN TSLGITTNMN NIGMLDIMIV ITLGAYKVQE EVFGSKLLEA EKTPLLYSWV TTLIELPIVK
201: GITPPHDKVV SFLQYLKNKV FKATPHAN

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.