Factsheet for PGSC0003DMT400063686

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099590.2.1	Tomato	cytosol	95.54	95.54
PGSC0003DMT400005534	Potato	cytosol	24.11	53.47
PGSC0003DMT400074054	Potato	cytosol	45.98	45.58
PGSC0003DMT400004540	Potato	cytosol	43.75	43.56
PGSC0003DMT400004531	Potato	cytosol	42.86	42.67
PGSC0003DMT400005532	Potato	cytosol	39.29	39.64
PGSC0003DMT400051271	Potato	cytosol	39.29	38.77
PGSC0003DMT400094155	Potato	cytosol	38.39	38.56
PGSC0003DMT400005551	Potato	mitochondrion	37.5	38.53
PGSC0003DMT400028619	Potato	cytosol	37.95	38.46
PGSC0003DMT400005547	Potato	cytosol	37.05	38.25
PGSC0003DMT400005549	Potato	cytosol	36.61	38.14
PGSC0003DMT400005557	Potato	cytosol	37.05	37.9
PGSC0003DMT400005536	Potato	cytosol	36.61	37.79
PGSC0003DMT400005546	Potato	cytosol	36.61	37.61
PGSC0003DMT400064983	Potato	cytosol	37.5	37.5
PGSC0003DMT400005538	Potato	cytosol	34.38	37.38
PGSC0003DMT400005542	Potato	cytosol	36.16	37.33
PGSC0003DMT400005561	Potato	cytosol	29.46	37.29
PGSC0003DMT400005552	Potato	cytosol	36.16	36.82
PGSC0003DMT400022251	Potato	cytosol	30.36	36.56
PGSC0003DMT400005572	Potato	cytosol	36.61	36.44
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.61	36.44
PGSC0003DMT400005544	Potato	cytosol	35.27	36.41
PGSC0003DMT400051375	Potato	cytosol	37.05	36.4
PGSC0003DMT400005571	Potato	cytosol	35.71	35.4
PGSC0003DMT400030631	Potato	cytosol	36.61	35.34
PGSC0003DMT400011275	Potato	cytosol	25.0	34.78
PGSC0003DMT400050289	Potato	cytosol	35.71	34.33
PGSC0003DMT400006306	Potato	cytosol	14.29	25.81

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102602918	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1CB11	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400024752	PGSC:PGSC0003DMG400024752
EnsemblPlants:PGSC0003DMT400063686	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF345	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002968F93	RefSeq:XP_006344661.1	SEG:seg	:

Description

Glutathione-S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400024752]

Coordinates

chr1:-:77318457..77319970

Molecular Weight (calculated)

25395.7 Da

IEP (calculated)

5.136

GRAVY (calculated)

0.076

Length

224 amino acids

Sequence
(BLAST)

001: MEDVKLLGTK ESIFTQRIMW ALKLKGICYE FIEQDFSSRS SPLLVKLNPV YNKVPVIVHD GNSLAESLVI LEYIEETWPL INPLFPVDPF ERASGRFWAR
101: FVDGKFYEAA KRAFFSSGET KAEGVESVVE GLHLLEGQII GKKFFGGEKI GYLDIIIGWI AYWFQYIEEI GEFKAMDSTK YPCLHAWINN FIQLPIIQQS
201: LPTPDVVKAV FRGFKDAAAL AGAN

Best Arabidopsis Sequence Match ( AT1G78370.1 )
(BLAST)

001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL

Arabidopsis Description

GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.