Factsheet for PGSC0003DMT400064983

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g086680.2.1	Tomato	cytosol	94.2	94.2
PGSC0003DMT400005534	Potato	cytosol	25.0	55.45
VIT_08s0007g01420.t01	Wine grape	cytosol	51.34	52.75
VIT_08s0007g01410.t01	Wine grape	cytosol	50.0	50.68
PGSC0003DMT400051271	Potato	cytosol	51.34	50.66
PGSC0003DMT400005546	Potato	cytosol	49.11	50.46
Bra034061.1-P	Field mustard	cytosol	50.89	50.44
PGSC0003DMT400005542	Potato	cytosol	48.66	50.23
PGSC0003DMT400005547	Potato	cytosol	48.66	50.23
PGSC0003DMT400005557	Potato	cytosol	49.11	50.23
CDY22184	Canola	cytosol	50.45	50.0
VIT_08s0007g01400.t01	Wine grape	cytosol	49.11	49.77
PGSC0003DMT400005538	Potato	cytosol	45.54	49.51
PGSC0003DMT400028619	Potato	cytosol	48.21	48.87
PGSC0003DMT400005544	Potato	cytosol	46.88	48.39
PGSC0003DMT400005532	Potato	cytosol	47.77	48.2
PGSC0003DMT400005552	Potato	cytosol	47.32	48.18
AT3G09270.1	Thale cress	cytosol	47.77	47.77
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.77	47.56
PGSC0003DMT400005536	Potato	cytosol	45.98	47.47
PGSC0003DMT400005572	Potato	cytosol	47.32	47.11
PGSC0003DMT400005549	Potato	cytosol	45.09	46.98
PGSC0003DMT400005551	Potato	mitochondrion	45.09	46.33
PGSC0003DMT400005561	Potato	cytosol	36.16	45.76
PGSC0003DMT400005571	Potato	cytosol	45.54	45.13
PGSC0003DMT400011275	Potato	cytosol	32.14	44.72
PGSC0003DMT400030631	Potato	cytosol	45.98	44.4
PGSC0003DMT400004540	Potato	cytosol	41.52	41.33
PGSC0003DMT400004531	Potato	cytosol	41.07	40.89
PGSC0003DMT400074054	Potato	cytosol	40.62	40.27
PGSC0003DMT400094155	Potato	cytosol	39.73	39.91
PGSC0003DMT400051375	Potato	cytosol	40.18	39.47
PGSC0003DMT400022251	Potato	cytosol	32.14	38.71
PGSC0003DMT400063686	Potato	cytosol	37.5	37.5
PGSC0003DMT400050289	Potato	cytosol	38.84	37.34
PGSC0003DMT400006306	Potato	cytosol	13.39	24.19

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102578973	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0046686	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1CD78	PFAM:PF00043	PFAM:PF02798
EnsemblPlantsGene:PGSC0003DMG400025242	PGSC:PGSC0003DMG400025242	EnsemblPlants:PGSC0003DMT400064983	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002953D1E	RefSeq:XP_006366496.1
SEG:seg	:	:	:	:	:

Description

Glutathione S-transferase T1 [Source:PGSC_GENE;Acc:PGSC0003DMG400025242]

Coordinates

chr1:-:66412488..66415021

Molecular Weight (calculated)

25660.1 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.248

Length

224 amino acids

Sequence
(BLAST)

001: MGEVNVHGIF AGPFNKRVEL ALKLKGVKYE YIEEDRSNKS DELVKYNPIY KQVPVLVHNG KPICESIIIL EYIDDTWESN TIPLLPKNPY QRSMARFLAK
101: LIDEKLMGAM YKVCYGKGEE KEKGCDETLE VLKYFDNELQ NKKFFGGDNL GFIDIVASYI ALWFGAIQEA IGMELLTEQK FPKLSKWIDE FLSSRIVKEN
201: LPTREVLVPL YKAQFAAATQ KVSS

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.