Factsheet for PGSC0003DMT400074054

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069040.2.1	Tomato	cytosol	94.25	94.25
VIT_17s0000g02950.t01	Wine grape	cytosol	64.16	64.44
VIT_17s0000g02930.t01	Wine grape	cytosol	64.16	64.44
VIT_17s0000g02920.t01	Wine grape	extracellular	61.06	62.44
PGSC0003DMT400005534	Potato	cytosol	26.99	60.4
KRH72040	Soybean	cytosol	55.75	56.0
VIT_17s0000g02940.t01	Wine grape	cytosol	43.36	55.37
PGSC0003DMT400004540	Potato	cytosol	47.79	48.0
PGSC0003DMT400004531	Potato	cytosol	46.46	46.67
PGSC0003DMT400063686	Potato	cytosol	45.58	45.98
PGSC0003DMT400005538	Potato	cytosol	41.59	45.63
PGSC0003DMT400028619	Potato	cytosol	43.81	44.8
PGSC0003DMT400005561	Potato	cytosol	34.96	44.63
PGSC0003DMT400005544	Potato	cytosol	42.48	44.24
PGSC0003DMT400005552	Potato	cytosol	42.92	44.09
PGSC0003DMT400005546	Potato	cytosol	42.48	44.04
PGSC0003DMT400005557	Potato	cytosol	42.04	43.38
PGSC0003DMT400005542	Potato	cytosol	41.59	43.32
PGSC0003DMT400051271	Potato	cytosol	43.36	43.17
PGSC0003DMT400094155	Potato	cytosol	42.48	43.05
PGSC0003DMT400005572	Potato	cytosol	42.48	42.67
PGSC0003DMT400005551	Potato	mitochondrion	40.71	42.2
PGSC0003DMT400005547	Potato	cytosol	39.82	41.47
PGSC0003DMT400005536	Potato	cytosol	39.82	41.47
PGSC0003DMT400005532	Potato	cytosol	40.27	40.99
PGSC0003DMT400005549	Potato	cytosol	38.94	40.93
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.71	40.89
PGSC0003DMT400064983	Potato	cytosol	40.27	40.62
PGSC0003DMT400005571	Potato	cytosol	40.27	40.27
PGSC0003DMT400030631	Potato	cytosol	40.71	39.66
PGSC0003DMT400022251	Potato	cytosol	31.42	38.17
PGSC0003DMT400051375	Potato	cytosol	38.5	38.16
PGSC0003DMT400050289	Potato	cytosol	36.73	35.62
PGSC0003DMT400011275	Potato	cytosol	23.89	33.54
PGSC0003DMT400006306	Potato	cytosol	11.95	21.77

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102584494	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1CT25	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400028783	PGSC:PGSC0003DMG400028783
EnsemblPlants:PGSC0003DMT400074054	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF481	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295604F	RefSeq:XP_006365401.1	:	:

Description

Glutathione S-transferase T4 [Source:PGSC_GENE;Acc:PGSC0003DMG400028783]

Coordinates

chr6:-:50739005..50742725

Molecular Weight (calculated)

25983.3 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.306

Length

226 amino acids

Sequence
(BLAST)

001: MGEVKLIGSS GSLFCTRVEW ALKLKGVDYE YIQEDLLNKS ELLIKSNPVH KKIPVLLHDD KPVVESLVIL EYIDETWKGY SLLPQDPHER ATARFWAKFV
101: DDKCVIGSWQ AMAMQDEGEA KAKTIESVQE LYAFIEKQIE GKKFFGGEQI GYLDLVMGWK TLWLSAMEEV GNVKLLDPEK FPSLHQWAEN FKEIPIIHES
201: MPQQETLVNY FQGGLNYLRS LETNKP

Best Arabidopsis Sequence Match ( AT2G29490.1 )
(BLAST)

001: MAEKEESVKL LGFWASPFSR RVEMALKLKG VPYEYLEEDL PNKTPLLLEL NPLHKKVPVL VHNDKILLES HLILEYIDQT WKNSPILPQD PYEKAMARFW
101: AKFIDDQILT LGFRSLVKAE KGREVAIEET RELLMFLEKE VTGKDFFGGK TIGFLDMIAG SMIPFCLARL WKGIGIDMIP EEKFPELNRW IKNLEEVEAV
201: RGCIPPREKQ IERMTKIAET IKSA

Arabidopsis Description

GSTU1Glutathione S-transferase U1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.