Factsheet for PGSC0003DMT400005561

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005534	Potato	cytosol	45.76	80.2
PGSC0003DMT400005571	Potato	cytosol	76.84	60.18
PGSC0003DMT400005547	Potato	cytosol	70.06	57.14
PGSC0003DMT400051271	Potato	cytosol	72.32	56.39
PGSC0003DMT400005557	Potato	cytosol	68.93	55.71
PGSC0003DMT400005549	Potato	cytosol	67.23	55.35
PGSC0003DMT400005572	Potato	cytosol	70.06	55.11
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.06	55.11
PGSC0003DMT400005544	Potato	cytosol	65.54	53.46
PGSC0003DMT400005536	Potato	cytosol	64.97	53.0
PGSC0003DMT400005538	Potato	cytosol	61.58	52.91
PGSC0003DMT400005552	Potato	cytosol	65.54	52.73
PGSC0003DMT400005542	Potato	cytosol	64.41	52.53
PGSC0003DMT400005551	Potato	mitochondrion	63.28	51.38
PGSC0003DMT400005546	Potato	cytosol	62.15	50.46
PGSC0003DMT400005532	Potato	cytosol	60.45	48.2
PGSC0003DMT400028619	Potato	cytosol	58.76	47.06
PGSC0003DMT400011275	Potato	cytosol	38.42	42.24
PGSC0003DMT400004531	Potato	cytosol	49.15	38.67
PGSC0003DMT400030631	Potato	cytosol	47.46	36.21
PGSC0003DMT400064983	Potato	cytosol	45.76	36.16
PGSC0003DMT400074054	Potato	cytosol	44.63	34.96
PGSC0003DMT400004540	Potato	cytosol	44.07	34.67
PGSC0003DMT400051375	Potato	cytosol	42.94	33.33
PGSC0003DMT400094155	Potato	cytosol	41.24	32.74
PGSC0003DMT400050289	Potato	cytosol	41.24	31.33
PGSC0003DMT400022251	Potato	cytosol	31.07	29.57
PGSC0003DMT400063686	Potato	cytosol	37.29	29.46
PGSC0003DMT400006306	Potato	cytosol	10.17	14.52

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M0ZQ36	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG401002177	PGSC:PGSC0003DMG401002177
EnsemblPlants:PGSC0003DMT400005561	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296C45C	SEG:seg	:	:

Description

Glutathione S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG401002177]

Coordinates

chr9:+:1057317..1061084

Molecular Weight (calculated)

20221.5 Da

IEP (calculated)

6.133

GRAVY (calculated)

-0.203

Length

177 amino acids

Sequence
(BLAST)

001: MEQVKLLGFW YSPFSHIVEW ALKIKGVNYE YIEEDRNNKS SLLLESNPIH KKIPVLIHNG KPICESLVIV EYIDETFEGP SILPKDPYDR ALAPFWAKFL
101: DDKVAVVVNA FLRKAEEHEK AKEEICEMLK ILDNDLKDRK LFLANKFGYA DMAAVMTQKA DVSGGKWTRA ITSGFGV

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.