Factsheet for PGSC0003DMT400004540

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g081270.2.1	Tomato	cytosol, endoplasmic reticulum	89.33	90.13
VIT_15s0024g01630.t01	Wine grape	cytosol	63.56	67.45
VIT_00s0153g00070.t01	Wine grape	cytosol	65.33	63.64
VIT_15s0024g01540.t01	Wine grape	cytosol	64.44	63.6
VIT_15s0024g01650.t01	Wine grape	cytosol	63.56	63.56
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	63.56	63.56
PGSC0003DMT400005534	Potato	cytosol	27.56	61.39
Os12t0123200-01	Rice	cytosol	44.89	49.75
PGSC0003DMT400004531	Potato	cytosol	48.89	48.89
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	57.78	48.15
PGSC0003DMT400005538	Potato	cytosol	44.0	48.06
PGSC0003DMT400005542	Potato	cytosol	46.22	47.93
PGSC0003DMT400074054	Potato	cytosol	48.0	47.79
PGSC0003DMT400005547	Potato	cytosol	44.89	46.54
PGSC0003DMT400005546	Potato	cytosol	44.44	45.87
PGSC0003DMT400005544	Potato	cytosol	44.0	45.62
PGSC0003DMT400005549	Potato	cytosol	43.11	45.12
PGSC0003DMT400005552	Potato	cytosol	44.0	45.0
PGSC0003DMT400005551	Potato	mitochondrion	43.56	44.95
TraesCS5A01G143500.1	Wheat	cytosol	46.22	44.64
PGSC0003DMT400005572	Potato	cytosol	44.44	44.44
PGSC0003DMT400005561	Potato	cytosol	34.67	44.07
PGSC0003DMT400051271	Potato	cytosol	44.44	44.05
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.0	44.0
PGSC0003DMT400063686	Potato	cytosol	43.56	43.75
PGSC0003DMT400028619	Potato	cytosol	42.67	43.44
PGSC0003DMT400005557	Potato	cytosol	42.22	43.38
PGSC0003DMT400005571	Potato	cytosol	43.11	42.92
Zm00001d052384_P001	Maize	cytosol	28.0	42.57
PGSC0003DMT400022251	Potato	cytosol	34.67	41.94
PGSC0003DMT400005536	Potato	cytosol	40.44	41.94
PGSC0003DMT400064983	Potato	cytosol	41.33	41.52
PGSC0003DMT400005532	Potato	cytosol	40.0	40.54
PGSC0003DMT400030631	Potato	cytosol	41.78	40.52
PGSC0003DMT400051375	Potato	cytosol	40.44	39.91
PGSC0003DMT400094155	Potato	cytosol	38.67	39.01
PGSC0003DMT400011275	Potato	cytosol	25.78	36.02
PGSC0003DMT400050289	Potato	cytosol	36.89	35.62
TraesCS5B01G142500.1	Wheat	cytosol	45.78	34.33
TraesCS5D01G148500.2	Wheat	cytosol	30.67	33.01
HORVU5Hr1G045850.3	Barley	cytosol	45.78	30.56
PGSC0003DMT400006306	Potato	cytosol	13.33	24.19

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102591927	EntrezGene:102592934	EntrezGene:107057662	MapMan:18.8.1.4	Gene3D:3.40.30.10
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M0ZNL6	PFAM:PF00043	PFAM:PF02798
EnsemblPlantsGene:PGSC0003DMG400001804	PGSC:PGSC0003DMG400001804	EnsemblPlants:PGSC0003DMT400004540	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF491	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296E6C2	RefSeq:XP_015167412.1

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400001804]

Coordinates

chr1:-:67560178..67561476

Molecular Weight (calculated)

26170.8 Da

IEP (calculated)

6.888

GRAVY (calculated)

-0.218

Length

225 amino acids

Sequence
(BLAST)

001: MADEVKLYRT WSSRFSLRIV WALHIKGIEY EAIFEDLSHK SPQLLQYNPV HKKVPVLVHQ GKPICESLVI LEYIDETWKK ETTPLLPQDP YEKAMARFWA
101: KFVDDKLLPS VTSVFTEKGY EAKKEALVPA VQNLELIEEQ LKGKKFFGGE SIGYVDLVLG WMAFLLDVFE EVIDLKLFDA HKFPLLSGWM KNFCDAPAIK
201: QHLPPRDRLV TKYQLLHEKY QTTSN

Best Arabidopsis Sequence Match ( AT2G29490.1 )
(BLAST)

001: MAEKEESVKL LGFWASPFSR RVEMALKLKG VPYEYLEEDL PNKTPLLLEL NPLHKKVPVL VHNDKILLES HLILEYIDQT WKNSPILPQD PYEKAMARFW
101: AKFIDDQILT LGFRSLVKAE KGREVAIEET RELLMFLEKE VTGKDFFGGK TIGFLDMIAG SMIPFCLARL WKGIGIDMIP EEKFPELNRW IKNLEEVEAV
201: RGCIPPREKQ IERMTKIAET IKSA

Arabidopsis Description

GSTU1Glutathione S-transferase U1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.