Factsheet for VIT_15s0024g01650.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g01630.t01	Wine grape	cytosol	91.56	97.17
VIT_00s0153g00070.t01	Wine grape	cytosol	92.89	90.48
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	88.89	88.89
VIT_15s0024g01540.t01	Wine grape	cytosol	81.33	80.26
VIT_06s0004g05680.t01	Wine grape	cytosol	34.22	70.64
VIT_06s0004g05710.t01	Wine grape	cytosol	24.0	69.23
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	76.44	63.7
Solyc01g081270.2.1	Tomato	cytosol, endoplasmic reticulum	63.11	63.68
PGSC0003DMT400004540	Potato	cytosol	63.56	63.56
VIT_17s0000g06120.t01	Wine grape	cytosol	28.89	59.09
Os12t0123200-01	Rice	cytosol	50.22	55.66
VIT_08s0040g00920.t01	Wine grape	cytosol	55.11	54.63
VIT_17s0000g02930.t01	Wine grape	cytosol	53.78	53.78
VIT_17s0000g02950.t01	Wine grape	cytosol	53.33	53.33
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	47.11	53.0
VIT_08s0007g01400.t01	Wine grape	cytosol	51.11	52.04
VIT_08s0007g01410.t01	Wine grape	cytosol	50.67	51.58
VIT_07s0005g04890.t01	Wine grape	cytosol	51.11	51.57
VIT_06s0004g05700.t01	Wine grape	cytosol	50.22	51.36
VIT_05s0051g00110.t01	Wine grape	cytosol	50.67	50.89
VIT_17s0000g02920.t01	Wine grape	extracellular	49.78	50.68
VIT_08s0007g01420.t01	Wine grape	cytosol	48.89	50.46
VIT_07s0005g04870.t01	Wine grape	cytosol	50.22	49.78
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	48.44	49.77
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	49.78	49.34
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	49.78	49.34
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	49.33	48.9
VIT_07s0005g04880.t01	Wine grape	cytosol	48.0	48.65
VIT_17s0000g02940.t01	Wine grape	cytosol	38.22	48.59
VIT_18s0001g07010.t01	Wine grape	cytosol	37.33	48.28
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	48.0	47.58
VIT_17s0000g06130.t01	Wine grape	cytosol	47.11	46.7
Zm00001d052384_P001	Maize	cytosol	30.67	46.62
VIT_16s0039g00970.t01	Wine grape	cytosol	48.89	46.61
TraesCS5A01G143500.1	Wheat	cytosol	48.0	46.35
VIT_16s0039g00990.t01	Wine grape	cytosol	48.44	46.19
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	48.44	45.61
VIT_17s0000g06110.t01	Wine grape	cytosol	47.11	44.92
VIT_14s0060g02170.t01	Wine grape	cytosol	45.78	44.59
VIT_16s0039g01070.t01	Wine grape	cytosol	46.22	44.07
VIT_01s0026g02370.t01	Wine grape	cytosol	43.56	42.98
VIT_17s0000g06140.t01	Wine grape	cytosol	44.0	42.86
VIT_01s0026g02390.t01	Wine grape	cytosol	43.11	42.54
VIT_01s0026g02400.t01	Wine grape	cytosol	40.89	40.53
VIT_18s0072g00320.t01	Wine grape	cytosol	48.44	38.93
TraesCS5B01G142500.1	Wheat	cytosol	46.22	34.67
VIT_06s0004g05670.t01	Wine grape	cytosol	52.89	33.81
TraesCS5D01G148500.2	Wheat	cytosol	31.11	33.49
HORVU5Hr1G045850.3	Barley	cytosol	47.56	31.75
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	21.33	28.4

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100245369	wikigene:100245369	EntrezGene:100259245	wikigene:100259245	MapMan:18.8.1.4
Gene3D:3.40.30.10	ProteinID:CCB62134	ProteinID:CCB62134.1	ncoils:Coil	UniProt:F6I5B6	EMBL:FN596748
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100245369
wikigene:LOC100245369	EntrezGene:LOC100259245	wikigene:LOC100259245	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF491	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00015C9E03	ArrayExpress:VIT_15s0024g01650	EnsemblPlantsGene:VIT_15s0024g01650	EnsemblPlants:VIT_15s0024g01650.t01	RefSeq:XP_002264055	RefSeq:XP_002264055.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:-:3425171..3425987

Molecular Weight (calculated)

25755.1 Da

IEP (calculated)

4.938

GRAVY (calculated)

-0.176

Length

225 amino acids

Sequence
(BLAST)

001: MAEEVKLFRT WSTPFALRIV WALKIKGVEY ETIFEDLYNK SPSLLQYNPA HKKVPVLVHN GKPISESYVI LEYIDETWKE TPLLPEDPYE RAMARFWAKF
101: GDDKVFTSIF GGVFVKEGKE QEEAMVEAME NLQFLEEELR GKKFFGGERI GFVDLALGWL ANLISILEDV AGLKIVGEDK FPLLSAWMKD FADSPIIKDN
201: WPPRDKMIAK FQALRDAKLA AAASK

Best Arabidopsis Sequence Match ( AT2G29490.1 )
(BLAST)

001: MAEKEESVKL LGFWASPFSR RVEMALKLKG VPYEYLEEDL PNKTPLLLEL NPLHKKVPVL VHNDKILLES HLILEYIDQT WKNSPILPQD PYEKAMARFW
101: AKFIDDQILT LGFRSLVKAE KGREVAIEET RELLMFLEKE VTGKDFFGGK TIGFLDMIAG SMIPFCLARL WKGIGIDMIP EEKFPELNRW IKNLEEVEAV
201: RGCIPPREKQ IERMTKIAET IKSA

Arabidopsis Description

GSTU1Glutathione S-transferase U1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.