Factsheet for VIT_17s0000g06150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g06140.t01	Wine grape	cytosol	82.84	60.61
VIT_17s0000g06130.t01	Wine grape	cytosol	54.44	40.53
VIT_17s0000g06110.t01	Wine grape	cytosol	55.03	39.41
PGSC0003DMT400006306	Potato	cytosol	27.81	37.9
PGSC0003DMT400050289	Potato	cytosol	44.97	32.62
Solyc03g116130.1.1	Tomato	cytosol	44.97	32.62
Solyc07g021460.1.1	Tomato	cytosol	34.91	31.89
Solyc12g062730.1.1	Tomato	cytosol	37.28	31.19
VIT_01s0026g02400.t01	Wine grape	cytosol	40.24	29.96
VIT_01s0026g02370.t01	Wine grape	cytosol	39.05	28.95
VIT_01s0026g02390.t01	Wine grape	cytosol	38.46	28.51
PGSC0003DMT400051375	Potato	cytosol	37.87	28.07
Solyc03g116120.1.1	Tomato	cytosol	34.32	25.89
VIT_05s0051g00110.t01	Wine grape	cytosol	33.14	25.0
VIT_16s0039g01070.t01	Wine grape	cytosol	34.32	24.58
VIT_18s0001g07010.t01	Wine grape	cytosol	24.85	24.14
GSMUA_Achr2P03090_001	Banana	extracellular	32.54	23.81
GSMUA_Achr5P11960_001	Banana	cytosol	28.99	23.56
VIT_07s0005g04880.t01	Wine grape	cytosol	30.77	23.42
VIT_07s0005g04890.t01	Wine grape	cytosol	30.77	23.32
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	30.18	23.29
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	27.22	23.0
VIT_08s0040g00920.t01	Wine grape	cytosol	30.77	22.91
VIT_16s0039g00970.t01	Wine grape	cytosol	31.95	22.88
VIT_17s0000g02940.t01	Wine grape	cytosol	23.67	22.6
VIT_16s0039g00990.t01	Wine grape	cytosol	31.36	22.46
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	29.59	22.22
VIT_17s0000g02950.t01	Wine grape	cytosol	29.59	22.22
VIT_14s0060g02170.t01	Wine grape	cytosol	30.18	22.08
VIT_17s0000g02930.t01	Wine grape	cytosol	28.99	21.78
VIT_17s0000g02920.t01	Wine grape	extracellular	28.4	21.72
VIT_07s0005g04870.t01	Wine grape	cytosol	28.99	21.59
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	28.99	21.59
VIT_15s0024g01650.t01	Wine grape	cytosol	28.4	21.33
VIT_15s0024g01630.t01	Wine grape	cytosol	26.63	21.23
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	28.4	21.15
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	28.4	21.15
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	28.4	21.15
VIT_15s0024g01540.t01	Wine grape	cytosol	28.4	21.05
GSMUA_Achr1P00010_001	Banana	cytosol	28.4	20.78
VIT_00s0153g00070.t01	Wine grape	cytosol	27.81	20.35
VIT_18s0072g00320.t01	Wine grape	cytosol	33.14	20.0
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	27.22	19.25
VIT_08s0007g01400.t01	Wine grape	cytosol	24.26	18.55
VIT_08s0007g01410.t01	Wine grape	cytosol	24.26	18.55
VIT_08s0007g01420.t01	Wine grape	cytosol	23.67	18.35
VIT_06s0004g05700.t01	Wine grape	cytosol	23.67	18.18
VIT_17s0000g06120.t01	Wine grape	cytosol	11.83	18.18
Zm00001d038192_P001	Maize	cytosol, mitochondrion	26.63	16.85
EES19527	Sorghum	cytosol	26.04	16.79
TraesCS1B01G269100.1	Wheat	cytosol	27.22	16.79
TraesCS1A01G258500.1	Wheat	cytosol	27.22	16.79
Os05t0412800-01	Rice	cytosol	27.22	16.79
Solyc08g062570.1.1	Tomato	cytosol	13.61	16.67
TraesCS1D01G257800.1	Wheat	cytosol	26.63	16.3
VIT_06s0004g05680.t01	Wine grape	cytosol	10.06	15.6
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	24.26	15.19
HORVU1Hr1G064890.1	Barley	cytosol	27.81	13.58
VIT_06s0004g05670.t01	Wine grape	cytosol	26.63	12.78
VIT_06s0004g05710.t01	Wine grape	cytosol	2.96	6.41

Protein Annotations

Gene3D:1.20.1050.10	MapMan:35.1	ProteinID:CBI15229	ProteinID:CBI15229.3	UniProt:D7SIB9	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407
GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:IPR010987
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616	UniParc:UPI0001BE0B67	ArrayExpress:VIT_17s0000g06150
EnsemblPlantsGene:VIT_17s0000g06150	EnsemblPlants:VIT_17s0000g06150.t01	RefSeq:XP_003634265	RefSeq:XP_003634265.1	:	:

Description

No Description!

Coordinates

chr17:+:6701821..6702672

Molecular Weight (calculated)

19041.4 Da

IEP (calculated)

4.830

GRAVY (calculated)

0.003

Length

169 amino acids

Sequence
(BLAST)

001: MENPSLSLSS FLNISMKPGR MLPGCCLMIY ERAKVRFWAS FLNQQLFEDM GRVITSDGEA QEKATKDLFE KLTILEEGMK DFFPGGTPSI NGENMGLLDI
101: LMYALFGPYK AHEEVLGMKM IDPERNSLLF SWVMALTELP VVKESTPPHE KLVALVQFIR QNALQSCVA

Best Arabidopsis Sequence Match ( AT5G62480.3 )
(BLAST)

001: MDEEVENKVI LHGSFASPYS KRIELALRLK SIPYQFVQED LQNKSQTLLR YNPVHKKIPV LVHNDPYRRS KVRFWANYIQ LHLYDLVIKV VKSEGEEQKK
101: ALTEVKEKLS VIEKEGLKEI FSDTDGEPTV TNETMSLVDI VMCTLLSPYK AHEEVLGLKI IDPEIVPGVY GWINAINETS VVKDLSPPYE QILEILRAFR
201: QMSLSPVLET YQS

Arabidopsis Description

GSTU9Glutathione S-transferase U9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.