CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038192_P001	Maize	cytosol, mitochondrion	91.6	89.89
Os05t0412800-01	Rice	cytosol	82.44	78.83
TraesCS1A01G258500.1	Wheat	cytosol	80.92	77.37
TraesCS1D01G257800.1	Wheat	cytosol	81.3	77.17
TraesCS1B01G269100.1	Wheat	cytosol	80.53	77.01
GSMUA_Achr5P27510_001	Banana	cytosol	54.2	64.25
GSMUA_Achr10P...	Banana	cytosol	56.49	63.52
GSMUA_Achr3P24970_001	Banana	cytosol	54.96	62.07
HORVU1Hr1G064890.1	Barley	cytosol	80.53	60.98
GSMUA_Achr11P...	Banana	cytosol	58.78	58.11
VIT_17s0000g06120.t01	Wine grape	cytosol	22.52	53.64
KRH54547	Soybean	cytosol	22.14	50.43
EER96890	Sorghum	cytosol	40.46	47.75
EES04220	Sorghum	cytosol	38.55	44.49
OQU88198	Sorghum	cytosol	37.4	42.98
EES04219	Sorghum	cytosol	37.02	42.73
EES04223	Sorghum	cytosol	37.79	42.13
EES04222	Sorghum	cytosol	37.4	41.7
VIT_01s0026g02400.t01	Wine grape	cytosol	35.5	40.97
VIT_01s0026g02370.t01	Wine grape	cytosol	35.11	40.35
VIT_01s0026g02390.t01	Wine grape	cytosol	34.73	39.91
OQU88200	Sorghum	cytosol	34.73	39.22
Solyc08g062570.1.1	Tomato	cytosol	20.61	39.13
Bra008157.1-P	Field mustard	cytosol	34.35	38.79
KXG34116	Sorghum	cytosol	29.77	38.61
VIT_17s0000g06140.t01	Wine grape	cytosol	33.97	38.53
KRH54548	Soybean	cytosol	34.35	38.3
Bra010088.1-P	Field mustard	cytosol	33.59	37.61
CDX86895	Canola	cytosol	33.59	37.61
CDY00291	Canola	cytosol	33.21	37.18
KXG34122	Sorghum	mitochondrion	34.35	36.89
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.21	36.86
EER88908	Sorghum	cytosol	33.21	36.4
CDY59707	Canola	cytosol	31.68	35.78
VIT_17s0000g06130.t01	Wine grape	cytosol	30.53	35.24
Solyc03g116130.1.1	Tomato	cytosol	31.3	35.19
AT5G62480.1	Thale cress	cytosol	32.06	35.0
PGSC0003DMT400051375	Potato	cytosol	30.15	34.65
CDX73100	Canola	cytosol	30.53	34.48
PGSC0003DMT400050289	Potato	cytosol	30.53	34.33
VIT_17s0000g06110.t01	Wine grape	cytosol	30.92	34.32
Solyc03g116120.1.1	Tomato	cytosol	29.01	33.93
CDX73101	Canola	cytosol	29.39	33.19
Bra015901.1-P	Field mustard	cytosol	29.01	32.76
CDX96555	Canola	cytosol	29.01	32.62
AT1G74590.1	Thale cress	cytosol	28.63	32.33
Solyc12g062730.1.1	Tomato	cytosol	24.05	31.19
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	16.79	26.04
Solyc07g021460.1.1	Tomato	cytosol	18.32	25.95
PGSC0003DMT400006306	Potato	cytosol	9.92	20.97

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8076957	UniProt:C5YXU8	EnsemblPlants:EES19527
ProteinID:EES19527	ProteinID:EES19527.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF354
EnsemblPlantsGene:SORBI_3009G137500	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.2610	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A893A5
RefSeq:XP_002441097.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49435800..49437253

Molecular Weight (calculated)

28614.9 Da

IEP (calculated)

4.674

GRAVY (calculated)

-0.051

Length

262 amino acids

Sequence
(BLAST)

001: MEKSSSENAT PLKLFGSWAS SYTHRVQLAL RLKGLEFDYV EEDLGNKSDE LLRHNPVHKK VPVLVHGGRA LPESVIILQY LDDAWPETRP LLPADAFDRA
101: LARFWCHFAD DKLGPAVGAV FASTGEDQEA AVRQVHENLA LLETELRDGA FRGRRFFGGD EVGLLDVVLG CGSYWLAVFE DVTGLRLVDA DAFPRFHAWL
201: RDFEALDEVR DTIPAVDRLL DYARGLRHML LGLAGAGAAA APSAPDAPTT AAAPAADIAV DI

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.