CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96555	Canola	cytosol	93.1	92.7
CDX73101	Canola	cytosol	88.79	88.79
CDY59707	Canola	cytosol	79.31	79.31
AT1G74590.1	Thale cress	cytosol	78.45	78.45
KRH54547	Soybean	cytosol	26.72	53.91
CDY00291	Canola	cytosol	40.95	40.6
CDX86895	Canola	cytosol	39.66	39.32
GSMUA_Achr2P03090_001	Banana	extracellular	38.79	38.96
GSMUA_Achr5P11960_001	Banana	cytosol	34.91	38.94
CDY40167	Canola	cytosol	35.78	37.05
CDY51369	Canola	cytosol	35.78	36.89
CDY22184	Canola	cytosol	35.78	36.73
CDX97887	Canola	cytosol	35.34	36.44
CDY45445	Canola	cytosol	34.91	36.16
CDY72138	Canola	cytosol	34.48	35.71
CDX83309	Canola	cytosol	34.48	35.71
CDY51364	Canola	cytosol	34.05	35.27
CDY51366	Canola	cytosol	34.05	35.27
CDX97884	Canola	cytosol	33.62	34.82
CDX97882	Canola	cytosol	33.62	34.82
CDY45446	Canola	cytosol	33.19	34.38
CDY53373	Canola	cytosol	33.19	34.38
GSMUA_Achr1P00010_001	Banana	cytosol	34.05	34.2
CDX97883	Canola	cytosol	32.33	32.89
CDY51365	Canola	cytosol	31.9	32.46
Os05t0412800-01	Rice	cytosol	37.5	31.75
Zm00001d038192_P001	Maize	cytosol, mitochondrion	36.21	31.46
EES19527	Sorghum	cytosol	34.48	30.53
TraesCS1A01G258500.1	Wheat	cytosol	34.91	29.56
TraesCS1B01G269100.1	Wheat	cytosol	34.48	29.2
TraesCS1D01G257800.1	Wheat	cytosol	34.48	28.99
CDY18883	Canola	cytosol, extracellular	16.81	23.21
HORVU1Hr1G064890.1	Barley	cytosol	34.05	22.83
CDY01992	Canola	cytosol, vacuole	10.34	19.2

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlants:CDX73100	ProteinID:CDX73100	ProteinID:CDX73100.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00103565001	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF15A1

Description

BnaC06g35480D

Coordinates

chrLK031797:-:2086167..2086948

Molecular Weight (calculated)

27035.6 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.312

Length

232 amino acids

Sequence
(BLAST)

001: MEEQKSKVIL HGMWASTYSK RVEIALKLKG ISYEYVEEDL KNKTETLIQL NPVHKKIPLL VHDGKPVAES QVILDYIDET WMSSPRFYPE DPYERAQVRF
101: WISYINQHVF DVMARVLYQK GEAATRSVEV ARERFEVLEE GLKKHFPNKI IRGNDDVGLL DIIIIASFGV HKVFHEAIGV EIIDPVNTPT LYNWIEQLQQ
201: LPVIKEVEVP HDRLVTFLQK YRQEHLQQAA NA

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.