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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039982.1-P Field mustard cytosol 96.88 96.88
CDX97884 Canola cytosol 95.98 95.98
AT2G29460.1 Thale cress cytosol 84.38 84.38
CDY45446 Canola cytosol 77.23 77.23
CDY53373 Canola cytosol 75.89 75.89
CDX97882 Canola cytosol 75.0 75.0
CDY51364 Canola cytosol 74.55 74.55
CDX97883 Canola cytosol 75.45 74.12
CDY51365 Canola cytosol 75.0 73.68
CDY18883 Canola cytosol, extracellular 54.02 72.02
VIT_06s0004g05680.t01 Wine grape cytosol 34.38 70.64
VIT_06s0004g05710.t01 Wine grape cytosol 23.21 66.67
CDX83309 Canola cytosol 64.29 64.29
CDY72138 Canola cytosol 64.29 64.29
CDY40167 Canola cytosol 63.84 63.84
CDY45445 Canola cytosol 63.39 63.39
CDY01992 Canola cytosol, vacuole 30.36 54.4
CDY51369 Canola cytosol 53.57 53.33
CDX97887 Canola cytosol 51.79 51.56
VIT_06s0004g05700.t01 Wine grape cytosol 48.66 49.55
CDY22184 Canola cytosol 45.98 45.58
VIT_14s0060g02170.t01 Wine grape cytosol 46.88 45.45
CDY59707 Canola cytosol 37.5 36.21
CDX86895 Canola cytosol 36.61 35.04
CDY00291 Canola cytosol 36.16 34.62
CDX73100 Canola cytosol 35.27 34.05
CDX73101 Canola cytosol 34.82 33.62
CDX96555 Canola cytosol 34.38 33.05
VIT_06s0004g05670.t01 Wine grape cytosol 51.79 32.95
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10UniProt:A0A078IN09EnsemblPlants:CDY51366ProteinID:CDY51366
ProteinID:CDY51366.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00003273001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF486SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EE88CD::::
Description
BnaA04g28600DBnaA04g28600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN09]
Coordinates
chrLK032988:+:51580..54454
Molecular Weight (calculated)
25733.6 Da
IEP (calculated)
5.477
GRAVY (calculated)
-0.118
Length
224 amino acids
Sequence
(BLAST)
001: MATKEEDVKL LGFWASPFSR RVEMALKLKG VSYEYLEQDI FNKSALLLEL NPVFKKVPVL VHKGKILAES HLILEYIDQT WKNNPILPQD PYEKAMARFW
101: AKFVDEQVGP VCFKSVVKAD KGIDVAIEEA QELITFLEKE LSGKDFFGGK TIGFLDLVAG SMIPFCVGRA WEGMGIDMIP EEKFPELNRW IKNLNDIEIV
201: RECIPQREKQ IEHMMKVAER IKLA
Best Arabidopsis Sequence Match ( AT2G29460.1 )
(BLAST)
001: MAEKEEDVKL LGFWASPFTR RVEMAFKLKG VPYEYLEQDI VNKSPLLLQI NPVYKKVPVL VYKGKILSES HVILEYIDQI WKNNPILPQD PYEKAMALFW
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
Arabidopsis Description
GSTU4Glutathione S-transferase U4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW27]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.