Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra039982.1-P | Field mustard | cytosol | 96.88 | 96.88 |
CDX97884 | Canola | cytosol | 95.98 | 95.98 |
AT2G29460.1 | Thale cress | cytosol | 84.38 | 84.38 |
CDY45446 | Canola | cytosol | 77.23 | 77.23 |
CDY53373 | Canola | cytosol | 75.89 | 75.89 |
CDX97882 | Canola | cytosol | 75.0 | 75.0 |
CDY51364 | Canola | cytosol | 74.55 | 74.55 |
CDX97883 | Canola | cytosol | 75.45 | 74.12 |
CDY51365 | Canola | cytosol | 75.0 | 73.68 |
CDY18883 | Canola | cytosol, extracellular | 54.02 | 72.02 |
VIT_06s0004g05680.t01 | Wine grape | cytosol | 34.38 | 70.64 |
VIT_06s0004g05710.t01 | Wine grape | cytosol | 23.21 | 66.67 |
CDX83309 | Canola | cytosol | 64.29 | 64.29 |
CDY72138 | Canola | cytosol | 64.29 | 64.29 |
CDY40167 | Canola | cytosol | 63.84 | 63.84 |
CDY45445 | Canola | cytosol | 63.39 | 63.39 |
CDY01992 | Canola | cytosol, vacuole | 30.36 | 54.4 |
CDY51369 | Canola | cytosol | 53.57 | 53.33 |
CDX97887 | Canola | cytosol | 51.79 | 51.56 |
VIT_06s0004g05700.t01 | Wine grape | cytosol | 48.66 | 49.55 |
CDY22184 | Canola | cytosol | 45.98 | 45.58 |
VIT_14s0060g02170.t01 | Wine grape | cytosol | 46.88 | 45.45 |
CDY59707 | Canola | cytosol | 37.5 | 36.21 |
CDX86895 | Canola | cytosol | 36.61 | 35.04 |
CDY00291 | Canola | cytosol | 36.16 | 34.62 |
CDX73100 | Canola | cytosol | 35.27 | 34.05 |
CDX73101 | Canola | cytosol | 34.82 | 33.62 |
CDX96555 | Canola | cytosol | 34.38 | 33.05 |
VIT_06s0004g05670.t01 | Wine grape | cytosol | 51.79 | 32.95 |
Protein Annotations
Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | UniProt:A0A078IN09 | EnsemblPlants:CDY51366 | ProteinID:CDY51366 |
ProteinID:CDY51366.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00003273001 | InterPro:Glutathione-S-Trfase_C-like |
InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF02798 | PFAM:PF13410 |
PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF486 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE88CD | : | : | : | : |
Description
BnaA04g28600DBnaA04g28600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN09]
Coordinates
chrLK032988:+:51580..54454
Molecular Weight (calculated)
25733.6 Da
IEP (calculated)
5.477
GRAVY (calculated)
-0.118
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKEEDVKL LGFWASPFSR RVEMALKLKG VSYEYLEQDI FNKSALLLEL NPVFKKVPVL VHKGKILAES HLILEYIDQT WKNNPILPQD PYEKAMARFW
101: AKFVDEQVGP VCFKSVVKAD KGIDVAIEEA QELITFLEKE LSGKDFFGGK TIGFLDLVAG SMIPFCVGRA WEGMGIDMIP EEKFPELNRW IKNLNDIEIV
201: RECIPQREKQ IEHMMKVAER IKLA
101: AKFVDEQVGP VCFKSVVKAD KGIDVAIEEA QELITFLEKE LSGKDFFGGK TIGFLDLVAG SMIPFCVGRA WEGMGIDMIP EEKFPELNRW IKNLNDIEIV
201: RECIPQREKQ IEHMMKVAER IKLA
001: MAEKEEDVKL LGFWASPFTR RVEMAFKLKG VPYEYLEQDI VNKSPLLLQI NPVYKKVPVL VYKGKILSES HVILEYIDQI WKNNPILPQD PYEKAMALFW
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
Arabidopsis Description
GSTU4Glutathione S-transferase U4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.