Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97883 | Canola | cytosol | 95.83 | 70.61 |
| CDY51365 | Canola | cytosol | 93.45 | 68.86 |
| AT2G29470.1 | Thale cress | cytosol | 78.57 | 58.67 |
| CDY51366 | Canola | cytosol | 72.02 | 54.02 |
| CDX97884 | Canola | cytosol | 70.83 | 53.12 |
| CDY45446 | Canola | cytosol | 66.67 | 50.0 |
| CDY51364 | Canola | cytosol | 64.88 | 48.66 |
| CDY53373 | Canola | cytosol | 64.29 | 48.21 |
| CDX97882 | Canola | cytosol | 63.69 | 47.77 |
| CDY01992 | Canola | cytosol, vacuole | 34.52 | 46.4 |
| CDY72138 | Canola | cytosol | 51.79 | 38.84 |
| CDX83309 | Canola | cytosol | 51.79 | 38.84 |
| CDY40167 | Canola | cytosol | 50.0 | 37.5 |
| CDY45445 | Canola | cytosol | 49.4 | 37.05 |
| CDY51369 | Canola | cytosol | 39.29 | 29.33 |
| VIT_14s0060g02170.t01 | Wine grape | cytosol | 39.88 | 29.0 |
| VIT_06s0004g05700.t01 | Wine grape | cytosol | 37.5 | 28.64 |
| CDX97887 | Canola | cytosol | 38.1 | 28.44 |
| VIT_06s0004g05680.t01 | Wine grape | cytosol | 17.26 | 26.61 |
| CDY22184 | Canola | cytosol | 35.71 | 26.55 |
| CDY59707 | Canola | cytosol | 26.79 | 19.4 |
| CDY00291 | Canola | cytosol | 26.79 | 19.23 |
| VIT_06s0004g05670.t01 | Wine grape | cytosol | 39.88 | 19.03 |
| CDX86895 | Canola | cytosol | 26.19 | 18.8 |
| CDX73100 | Canola | cytosol | 23.21 | 16.81 |
| CDX73101 | Canola | cytosol | 22.62 | 16.38 |
| CDX96555 | Canola | cytosol | 22.02 | 15.88 |
| VIT_06s0004g05710.t01 | Wine grape | cytosol | 5.36 | 11.54 |
Protein Annotations
| EnsemblPlants:CDY18883 | EnsemblPlantsGene:GSBRNA2T00006071001 | Gene3D:1.20.1050.10 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:IPR010987 |
| PANTHER:PTHR11260 | PANTHER:PTHR11260:SF486 | PFAM:PF13410 | PFscan:PS50405 | ProteinID:CDY18883 | ProteinID:CDY18883.1 |
| SEG:seg | SUPFAM:SSF47616 | UniParc:UPI0004EF05CB | UniProt:A0A078G2I9 | MapMan:35.1 | : |
Description
BnaC04g04670DBnaC04g04670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2I9]
Coordinates
chrLK032090:+:125245..130168
Molecular Weight (calculated)
19492.1 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.014
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLTVFDCIC SHLILEYIDQ TWTRNPILPQ DPYGKAMARF WAKFVDEQVT LIGFRSLVKS EEIDVAIKEA QELITYLEKE ITGKMFFGGE TIGFLDIVVG
101: SMIPFCLVRG WEGMGIDMIP KEKFPELNRW IEKIKEIEIV RECIPNREKN IEHMMKIVGR IKAASKTP
101: SMIPFCLVRG WEGMGIDMIP KEKFPELNRW IEKIKEIEIV RECIPNREKN IEHMMKIVGR IKAASKTP
001: MGKNEEVKLL GIWASPFSRR IEMALKLKGV PYEYLEEDLE NKSSLLLALS PIHKKIPVLV HNGKTIIESH VILEYIDETW KHNPILPQDP FQRSKARVLA
101: KLVDEKIVNV GFASLAKTEK GREVLIEQTR ELIMCLEKEL AGKDYFGGKT VGFLDFVAGS MIPFCLERAW EGMGVEMITE KKFPEYNKWV KKLKEVEIVV
201: DCIPLREKHI EHMNNMAEKI RSA
101: KLVDEKIVNV GFASLAKTEK GREVLIEQTR ELIMCLEKEL AGKDYFGGKT VGFLDFVAGS MIPFCLERAW EGMGVEMITE KKFPEYNKWV KKLKEVEIVV
201: DCIPLREKHI EHMNNMAEKI RSA
Arabidopsis Description
GSTU6GSTU6 [Source:UniProtKB/TrEMBL;Acc:A0A178VUQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.