CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039983.1-P	Field mustard	cytosol	99.12	99.12
CDX97883	Canola	cytosol	97.37	97.37
CDY18883	Canola	cytosol, extracellular	68.86	93.45
AT2G29470.1	Thale cress	cytosol	83.33	84.44
CDY51366	Canola	cytosol	73.68	75.0
CDX97884	Canola	cytosol	73.25	74.55
CDY45446	Canola	cytosol	69.3	70.54
CDY51364	Canola	cytosol	68.42	69.64
CDY53373	Canola	cytosol	68.42	69.64
CDX97882	Canola	cytosol	67.54	68.75
VIT_06s0004g05710.t01	Wine grape	cytosol	22.81	66.67
VIT_06s0004g05680.t01	Wine grape	cytosol	31.14	65.14
CDX83309	Canola	cytosol	59.21	60.27
CDY72138	Canola	cytosol	59.21	60.27
CDY40167	Canola	cytosol	58.33	59.38
CDY45445	Canola	cytosol	57.46	58.48
CDY51369	Canola	cytosol	46.49	47.11
CDX97887	Canola	cytosol	45.18	45.78
CDY01992	Canola	cytosol, vacuole	25.0	45.6
VIT_06s0004g05700.t01	Wine grape	cytosol	43.42	45.0
CDY22184	Canola	cytosol	43.86	44.25
VIT_14s0060g02170.t01	Wine grape	cytosol	42.98	42.42
CDY00291	Canola	cytosol	36.4	35.47
CDX86895	Canola	cytosol	35.96	35.04
CDY59707	Canola	cytosol	35.53	34.91
CDX73100	Canola	cytosol	32.46	31.9
CDX73101	Canola	cytosol	31.58	31.03
CDX96555	Canola	cytosol	31.14	30.47
VIT_06s0004g05670.t01	Wine grape	cytosol	46.05	29.83

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078IJY8	EnsemblPlants:CDY51365	ProteinID:CDY51365
ProteinID:CDY51365.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00003272001	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF33EE	SEG:seg	:	:	:

Description

BnaA04g28590DBnaA04g28590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJY8]

Coordinates

chrLK032988:+:43811..45042

Molecular Weight (calculated)

26299.4 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.104

Length

228 amino acids

Sequence
(BLAST)

001: MAEKEEDVLL IGSWASPFSR RVEMALKLKG VPYDYSDEDY LVTKSPLLLQ LNPIYKKVPV FVHKGKVLLE SHLILEYIDQ TWTRNPILPQ DPYGKAMARF
101: WAKFVDEQVT LIGFRSLVKS EEIDVAIKEA QELITYLEKE ITGKMFFGGE TIGFLDMVVG SMIPFCLVRG WEGMGIDMIP NEQFPELNRW IEKIKEIEIV
201: RECIPNREKN IEHMMKIVGR IKAASKTA

Best Arabidopsis Sequence Match ( AT2G29470.1 )
(BLAST)

001: MAEKEEGVKL IGSWASPFSR RVEMALKLKG VPYDYLDEDY LVVKSPLLLQ LNPVYKKVPV LVHNGKILPE SQLILEYIDQ TWTNNPILPQ SPYDKAMARF
101: WAKFVDEQVT MIGLRSLVKS EKRIDVAIEE VQELIMLLEN QITGKKLFGG ETIGFLDMVV GSMIPFCLAR AWEGMGIDMI PEEKFPELNR WIKNLKEIEI
201: VRECIPDREK HIEHMMKIVG RIKAV

Arabidopsis Description

GSTU3Glutathione S-transferase U3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.