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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05670.t01
VIT_06s0004g05680.t01
VIT_06s0004g05700.t01
VIT_06s0004g05710.t01
VIT_10s0003g04250.t01
VIT_14s0060g02170.t01
VIT_18s0122g00510.t01
VIT_19s0093g00320.t01
VIT_19s0093g00350.t01
VIT_19s0093g00370.t01
VIT_19s0093g00400.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G29420.1 VIT_10s0003g04250.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00320.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00350.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00370.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_19s0093g00400.t01 AT1G17190.1 21798944
AT2G29420.1 VIT_10s0003g04250.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00320.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00350.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00370.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_19s0093g00400.t01 AT1G78380.1 21798944
AT2G29420.1 VIT_06s0004g05670.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05680.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05700.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_06s0004g05710.t01 AT2G29490.1 21798944
AT2G29420.1 VIT_14s0060g02170.t01 AT2G29490.1 21798944
AT2G29480.1 VIT_18s0122g00510.t01 AT1G20950.1 21798944
AT2G29490.1 VIT_10s0003g04250.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00320.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00350.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00370.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_19s0093g00400.t01 AT1G17180.1 21798944
AT2G29490.1 VIT_10s0003g04250.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00320.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00350.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00370.t01 AT1G78380.1 21798944
AT2G29490.1 VIT_19s0093g00400.t01 AT1G78380.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g05710.t01 Wine grape cytosol 19.03 85.9
VIT_06s0004g05680.t01 Wine grape cytosol 26.14 84.4
VIT_06s0004g05700.t01 Wine grape cytosol 47.44 75.91
VIT_14s0060g02170.t01 Wine grape cytosol 41.76 63.64
VIT_17s0000g06120.t01 Wine grape cytosol 19.03 60.91
VIT_08s0007g01410.t01 Wine grape cytosol 38.07 60.63
VIT_08s0007g01420.t01 Wine grape cytosol 37.22 60.09
VIT_08s0007g01400.t01 Wine grape cytosol 37.22 59.28
VIT_15s0024g01630.t01 Wine grape cytosol 34.38 57.08
CDY51369 Canola cytosol 34.66 54.22
VIT_05s0051g00130.t01 Wine grape endoplasmic reticulum 30.68 54.0
Bra039980.1-P Field mustard cytosol 34.38 53.78
CDX97887 Canola cytosol 34.38 53.78
AT2G29420.1 Thale cress cytosol 34.66 53.74
VIT_00s0153g00050.t01 Wine grape endoplasmic reticulum 34.09 53.33
VIT_15s0024g01650.t01 Wine grape cytosol 33.81 52.89
VIT_17s0000g02930.t01 Wine grape cytosol 33.52 52.44
VIT_17s0000g02950.t01 Wine grape cytosol 33.24 52.0
CDY51366 Canola cytosol 32.95 51.79
Bra039984.1-P Field mustard cytosol 32.39 51.35
VIT_15s0024g01540.t01 Wine grape cytosol 33.24 51.32
VIT_00s0153g00070.t01 Wine grape cytosol 33.52 51.08
Bra039982.1-P Field mustard cytosol 32.39 50.89
AT2G29490.1 Thale cress cytosol 32.39 50.89
CDX97884 Canola cytosol 32.39 50.89
AT2G29480.1 Thale cress cytosol 32.39 50.67
CDY45445 Canola cytosol 32.1 50.45
CDY40167 Canola cytosol 32.1 50.45
CDX83309 Canola cytosol 31.82 50.0
AT2G29460.1 Thale cress cytosol 31.82 50.0
CDX97882 Canola cytosol 31.82 50.0
Bra018386.1-P Field mustard cytosol 31.82 50.0
CDY72138 Canola cytosol 31.82 50.0
Bra000474.1-P Field mustard cytosol 31.82 50.0
CDY51364 Canola cytosol 31.82 50.0
AT2G29470.1 Thale cress cytosol 31.82 49.78
AT2G29440.1 Thale cress cytosol 31.53 49.78
AT2G29450.1 Thale cress cytosol 31.53 49.55
CDY53373 Canola cytosol 31.53 49.55
VIT_07s0005g04890.t01 Wine grape cytosol 31.25 49.33
CDY45446 Canola cytosol 31.25 49.11
VIT_05s0051g00180.t01 Wine grape endoplasmic reticulum 30.4 48.86
VIT_05s0051g00110.t01 Wine grape cytosol 30.4 47.77
CDX97883 Canola cytosol 30.68 47.37
VIT_07s0005g04880.t01 Wine grape cytosol 29.83 47.3
VIT_08s0040g00920.t01 Wine grape cytosol 30.4 47.14
VIT_17s0000g02920.t01 Wine grape extracellular 29.55 47.06
CDY51365 Canola cytosol 29.83 46.05
Bra039983.1-P Field mustard cytosol 29.55 45.61
VIT_07s0005g04870.t01 Wine grape cytosol 29.26 45.37
VIT_16s0039g00990.t01 Wine grape cytosol 30.11 44.92
VIT_18s0001g07010.t01 Wine grape cytosol 22.16 44.83
VIT_16s0039g00970.t01 Wine grape cytosol 29.26 43.64
VIT_17s0000g06140.t01 Wine grape cytosol 28.41 43.29
VIT_01s0026g02390.t01 Wine grape cytosol 27.84 42.98
VIT_17s0000g02940.t01 Wine grape cytosol 21.59 42.94
VIT_05s0049g01100.t01 Wine grape endoplasmic reticulum 27.56 42.73
VIT_01s0026g02400.t01 Wine grape cytosol 27.56 42.73
VIT_17s0000g06110.t01 Wine grape cytosol 28.41 42.37
VIT_05s0049g01120.t01 Wine grape endoplasmic reticulum 27.27 42.29
VIT_05s0049g01090.t01 Wine grape endoplasmic reticulum 27.27 42.29
VIT_05s0049g01070.t01 Wine grape cytosol, endoplasmic reticulum 27.27 42.29
VIT_01s0026g02370.t01 Wine grape cytosol 27.27 42.11
VIT_16s0039g01070.t01 Wine grape cytosol 28.12 41.95
VIT_17s0000g06130.t01 Wine grape cytosol 26.99 41.85
VIT_18s0072g00320.t01 Wine grape cytosol 32.95 41.43
Bra018385.1-P Field mustard cytosol 21.59 40.0
CDY18883 Canola cytosol, extracellular 19.03 39.88
VIT_05s0049g01080.t01 Wine grape cytosol, endoplasmic reticulum 26.7 39.33
VIT_15s0107g00150.t01 Wine grape endoplasmic reticulum, plastid 27.84 36.3
CDY01992 Canola cytosol, vacuole 10.8 30.4
VIT_17s0000g06150.t01 Wine grape cytosol, plastid 12.78 26.63
Protein Annotations
Gene3D:1.20.1050.10EntrezGene:100241712wikigene:100241712EntrezGene:100246830wikigene:100246830MapMan:18.8.1.4
Gene3D:3.40.30.10EMBL:AM432065ProteinID:CAN73675ProteinID:CAN73675.1ProteinID:CAN73676ProteinID:CAN73676.1
ProteinID:CCB43526ProteinID:CCB43526.1ncoils:CoilUniProt:F6GUW8EMBL:FN594951GO:GO:0003674
GO:GO:0003824GO:GO:0004364GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006749GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009407GO:GO:0009987GO:GO:0016740GO:GO:0019748InterPro:GST_CInterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987EntrezGene:LOC100241712wikigene:LOC100241712
EntrezGene:LOC100246830wikigene:LOC100246830PFAM:PF00043PFAM:PF02798PFscan:PS50404PFscan:PS50405
PANTHER:PTHR11260PANTHER:PTHR11260:SF486SUPFAM:SSF47616SUPFAM:SSF52833TIGR:TC68705InterPro:Thioredoxin-like_sf
UniParc:UPI00021091C2ArrayExpress:VIT_06s0004g05670EnsemblPlantsGene:VIT_06s0004g05670EnsemblPlants:VIT_06s0004g05670.t01RefSeq:XP_002281694RefSeq:XP_002281694.1
RefSeq:XP_002281843RefSeq:XP_002281843.1SEG:seg:::
Description
No Description!
Coordinates
chr6:+:6476931..6484106
Molecular Weight (calculated)
40112.9 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.136
Length
352 amino acids
Sequence
(BLAST)
001: MARFWAKYMD DKLLPAAIKV AMSKGEEQKG VIEEIQKQLK TLESELKEKK FFGGESLGFV DIAANTIVWL VVAQEALGME ILTEEKFPVL HGWYQRLVDD
101: AVFKECMPPR EQHLSFVKGI SMAAISLQTA TMAEEVKLFG TWASPFSRRI EVALKLKGVQ FEYIEENLSN KSPALLKYNP VHKKIPVLVH NGKPVAESLV
201: ILEYIDETWK HNPILPTDPY EKAMARFWAK YMDDKLWPAA TKVVVSKGEE QKAVIEEIQE QLKTLESELK EKKFFGGESL GFVDIAANII VFLLVAQEAL
301: GLMEILTEEK FPVLHEWYQR LVDDAVFKEC VPPRERHLGF FKARFGSSTA SK
Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)
001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA
Arabidopsis Description
GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.