Factsheet for VIT_16s0039g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g00970.t01	Wine grape	cytosol	97.03	97.03
VIT_16s0039g01070.t01	Wine grape	cytosol	79.66	79.66
VIT_17s0000g06120.t01	Wine grape	cytosol	31.78	68.18
VIT_06s0004g05710.t01	Wine grape	cytosol	22.46	67.95
VIT_06s0004g05680.t01	Wine grape	cytosol	30.93	66.97
VIT_08s0007g01400.t01	Wine grape	cytosol	49.58	52.94
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	44.49	52.5
VIT_08s0007g01410.t01	Wine grape	cytosol	48.73	52.04
VIT_08s0007g01420.t01	Wine grape	cytosol	47.88	51.83
VIT_05s0051g00110.t01	Wine grape	cytosol	48.31	50.89
VIT_07s0005g04890.t01	Wine grape	cytosol	47.88	50.67
VIT_15s0024g01630.t01	Wine grape	cytosol	45.34	50.47
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	45.76	49.32
VIT_17s0000g06130.t01	Wine grape	cytosol	47.03	48.9
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	46.61	48.89
VIT_15s0024g01540.t01	Wine grape	cytosol	47.03	48.68
VIT_15s0024g01650.t01	Wine grape	cytosol	46.19	48.44
VIT_07s0005g04870.t01	Wine grape	cytosol	45.76	47.58
VIT_08s0040g00920.t01	Wine grape	cytosol	45.76	47.58
VIT_17s0000g02930.t01	Wine grape	cytosol	44.92	47.11
VIT_17s0000g02920.t01	Wine grape	extracellular	44.07	47.06
VIT_17s0000g06110.t01	Wine grape	cytosol	47.03	47.03
VIT_17s0000g02950.t01	Wine grape	cytosol	44.49	46.67
VIT_17s0000g06140.t01	Wine grape	cytosol	45.34	46.32
VIT_00s0153g00070.t01	Wine grape	cytosol	44.92	45.89
VIT_06s0004g05700.t01	Wine grape	cytosol	42.37	45.45
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	43.64	45.37
VIT_01s0026g02370.t01	Wine grape	cytosol	43.64	45.18
VIT_07s0005g04880.t01	Wine grape	cytosol	42.37	45.05
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	43.22	44.93
VIT_01s0026g02400.t01	Wine grape	cytosol	43.22	44.93
VIT_14s0060g02170.t01	Wine grape	cytosol	43.64	44.59
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	42.8	44.49
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	42.8	44.49
VIT_01s0026g02390.t01	Wine grape	cytosol	42.8	44.3
VIT_18s0001g07010.t01	Wine grape	cytosol	32.63	44.25
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	43.22	42.68
VIT_17s0000g02940.t01	Wine grape	cytosol	31.36	41.81
VIT_18s0072g00320.t01	Wine grape	cytosol	45.76	38.57
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	41.95	36.67
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	22.46	31.36
VIT_06s0004g05670.t01	Wine grape	cytosol	44.92	30.11

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100254521	wikigene:100254521	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:AM427051
ProteinID:CAN73419	ProteinID:CAN73419.1	ProteinID:CCB50551	ProteinID:CCB50551.1	ncoils:Coil	UniProt:F6HEA5
EMBL:FN595750	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
EntrezGene:LOC100254521	wikigene:LOC100254521	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF399	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001984EC4
ArrayExpress:VIT_16s0039g00990	EnsemblPlantsGene:VIT_16s0039g00990	EnsemblPlants:VIT_16s0039g00990.t01	RefSeq:XP_002266994.1	SEG:seg	:

Description

No Description!

Coordinates

chr16:-:539516..543630

Molecular Weight (calculated)

27030.0 Da

IEP (calculated)

6.523

GRAVY (calculated)

-0.205

Length

236 amino acids

Sequence
(BLAST)

001: MASGAMQEEQ VKLLGIWFSP FVRRIEWALK FKGIEYEYVE EDLTNKSSLL LTSNPVHQKV PVLLHNGNPI VESLVIIEYI DENWKQNPIL PQDPHERAKA
101: RFWANFIEQK ITEATRTALV TEGEQQKKVV KELKEAMEVL EGEAAAKLND KTLFFGGKNG LGYVDIVLGW ICNWVEVIEE VGGFKVLDPQ KQPHIHKWMA
201: NFVEVPLIKP TLLPKEKMVV CFQMVRQAHL GLDAKK

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.