Factsheet for VIT_18s0001g07010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62275	Soybean	cytosol	39.66	61.06
Solyc01g081310.2.1	Tomato	cytosol	59.2	45.78
PGSC0003DMT400004531	Potato	cytosol	58.05	44.89
VIT_06s0004g05710.t01	Wine grape	cytosol	20.11	44.87
KRH52989	Soybean	cytosol	38.51	42.95
KRH62274	Soybean	extracellular	23.56	39.81
VIT_05s0051g00110.t01	Wine grape	cytosol	51.15	39.73
VIT_15s0024g01630.t01	Wine grape	cytosol	48.28	39.62
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	45.4	39.5
VIT_15s0024g01540.t01	Wine grape	cytosol	51.15	39.04
VIT_07s0005g04890.t01	Wine grape	cytosol	50.0	39.01
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	48.85	38.81
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	50.0	38.67
VIT_06s0004g05680.t01	Wine grape	cytosol	24.14	38.53
VIT_00s0153g00070.t01	Wine grape	cytosol	50.0	37.66
VIT_08s0040g00920.t01	Wine grape	cytosol	48.85	37.44
Zm00001d020780_P001	Maize	extracellular	47.7	37.39
VIT_07s0005g04880.t01	Wine grape	cytosol	47.7	37.39
VIT_15s0024g01650.t01	Wine grape	cytosol	48.28	37.33
EER96890	Sorghum	cytosol	47.13	36.94
TraesCS5D01G254000.1	Wheat	cytosol	46.55	36.65
TraesCS5B01G244700.1	Wheat	cytosol	46.55	36.49
Os09t0467200-01	Rice	plastid	45.98	35.87
VIT_17s0000g02920.t01	Wine grape	extracellular	44.83	35.29
VIT_17s0000g02950.t01	Wine grape	cytosol	45.4	35.11
VIT_17s0000g02930.t01	Wine grape	cytosol	45.4	35.11
VIT_17s0000g06120.t01	Wine grape	cytosol	21.84	34.55
VIT_07s0005g04870.t01	Wine grape	cytosol	44.83	34.36
VIT_08s0007g01410.t01	Wine grape	cytosol	42.53	33.48
VIT_06s0004g05700.t01	Wine grape	cytosol	41.95	33.18
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	43.1	33.04
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	43.1	33.04
VIT_08s0007g01400.t01	Wine grape	cytosol	41.95	33.03
VIT_08s0007g01420.t01	Wine grape	cytosol	41.38	33.03
VIT_14s0060g02170.t01	Wine grape	cytosol	43.68	32.9
VIT_16s0039g00970.t01	Wine grape	cytosol	44.25	32.63
VIT_16s0039g00990.t01	Wine grape	cytosol	44.25	32.63
VIT_16s0039g01070.t01	Wine grape	cytosol	44.25	32.63
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	42.53	32.6
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	41.95	32.16
VIT_01s0026g02400.t01	Wine grape	cytosol	41.38	31.72
VIT_01s0026g02390.t01	Wine grape	cytosol	41.38	31.58
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	43.1	31.38
VIT_17s0000g06130.t01	Wine grape	cytosol	40.8	31.28
VIT_01s0026g02370.t01	Wine grape	cytosol	40.8	31.14
VIT_17s0000g02940.t01	Wine grape	cytosol	31.61	31.07
TraesCS5A01G247500.2	Wheat	cytosol	33.33	31.02
VIT_17s0000g06110.t01	Wine grape	cytosol	40.8	30.08
VIT_17s0000g06140.t01	Wine grape	cytosol	39.66	29.87
VIT_18s0072g00320.t01	Wine grape	cytosol	47.13	29.29
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	41.95	27.04
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	24.14	24.85
VIT_06s0004g05670.t01	Wine grape	cytosol	44.83	22.16

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	ProteinID:CCB45621	ProteinID:CCB45621.1	ncoils:Coil	UniProt:F6H0Z9
EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF494
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00021089B4	ArrayExpress:VIT_18s0001g07010	EnsemblPlantsGene:VIT_18s0001g07010
EnsemblPlants:VIT_18s0001g07010.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:5244635..5245588

Molecular Weight (calculated)

19742.4 Da

IEP (calculated)

7.214

GRAVY (calculated)

-0.017

Length

174 amino acids

Sequence
(BLAST)

001: MAGNGDGVQL LGYWASPFAL RIKWALKLKE IHYEYVEDHL LDKSPMLLQY NPVHKKIPVL VHKAFSKVGA EQEQAAKELR ENLKTLESAL EGKHFFGGET
101: IGFLDIAVGW IGCWARMNEE VAGVNMIDVE MTPLLGAWFQ KFLKLPIIKE CLPPQDKLLV HTKEFHKMLM AALT

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.