Factsheet for Zm00001d020780_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96890	Sorghum	cytosol	92.79	92.79
TraesCS5D01G254000.1	Wheat	cytosol	83.78	84.16
Os09t0467200-01	Rice	plastid	82.88	82.51
TraesCS5B01G244700.1	Wheat	cytosol	82.43	82.43
TraesCS5A01G247500.2	Wheat	cytosol	66.22	78.61
KRH62274	Soybean	extracellular	28.83	62.14
VIT_08s0040g00920.t01	Wine grape	cytosol	51.35	50.22
KRH52989	Soybean	cytosol	34.68	49.36
Zm00001d042095_P001	Maize	cytosol, extracellular	51.35	49.35
Solyc01g081310.2.1	Tomato	cytosol	48.65	48.0
VIT_18s0001g07010.t01	Wine grape	cytosol	37.39	47.7
Zm00001d042104_P001	Maize	cytosol	48.65	47.58
PGSC0003DMT400004531	Potato	cytosol	47.75	47.11
Zm00001d052384_P001	Maize	cytosol	31.08	46.62
Zm00001d042099_P001	Maize	cytosol, plastid	46.85	45.61
Zm00001d042098_P001	Maize	cytosol	45.5	44.69
Zm00001d042102_P001	Maize	cytosol	40.54	44.34
KRH62275	Soybean	cytosol	21.62	42.48
Zm00001d018220_P001	Maize	cytosol	45.5	42.44
Zm00001d038192_P001	Maize	cytosol, mitochondrion	48.2	40.07
Zm00001d042096_P001	Maize	extracellular	40.54	38.3

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:541845	UniProt:A0A1R3QP52	EMBL:AF244688
EMBL:AF244701	EMBL:BT040471	EMBL:EU963788	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0016740
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
ProteinID:ONM55576.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF377	UniProt:Q9FQA3	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00000A2FA9
EnsemblPlantsGene:Zm00001d020780	EnsemblPlants:Zm00001d020780_P001	EnsemblPlants:Zm00001d020780_T001	SEG:seg	:	:

Description

glutathione transferase23 glutathione transferase23

Coordinates

chr7:+:132447942..132449006

Molecular Weight (calculated)

24880.1 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.079

Length

222 amino acids

Sequence
(BLAST)

001: MAEKGVKVLG MWASPMVIRV EWALRLKGVE YEYVDEDLAN KSADLLRHNP VTKKVPVLVH DGKPVAESTI IVEYIDEVWK GGYPIMPGDP YERAQARFWA
101: RFAEDKCNAA LYPIFTATGE AQRKAVHEAQ QCLKTLETAL EGKKFFGGDA VGYLDIVVGW FAHWLPVIEE VTGASVVTHE ELPLMKAWFG RFLALDVVKA
201: ALPDRDRLLA ANKARREQLL SA

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.