Factsheet for TraesCS5B01G244700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G254000.1	Wheat	cytosol	90.99	91.4
TraesCS5A01G247500.2	Wheat	cytosol	70.27	83.42
Zm00001d020780_P001	Maize	extracellular	82.43	82.43
EER96890	Sorghum	cytosol	81.53	81.53
Os09t0467200-01	Rice	plastid	78.83	78.48
KRH62274	Soybean	extracellular	27.93	60.19
VIT_08s0040g00920.t01	Wine grape	cytosol	52.7	51.54
KRH52989	Soybean	cytosol	35.59	50.64
Solyc01g081310.2.1	Tomato	cytosol	50.0	49.33
PGSC0003DMT400004531	Potato	cytosol	49.1	48.44
VIT_18s0001g07010.t01	Wine grape	cytosol	36.49	46.55
TraesCS3B01G540700.1	Wheat	cytosol	40.54	45.45
TraesCS4B01G274400.1	Wheat	cytosol	45.5	43.72
TraesCS3B01G535300.1	Wheat	cytosol	45.05	43.67
TraesCS3B01G539100.1	Wheat	peroxisome	45.05	43.48
KRH62275	Soybean	cytosol	22.07	43.36
TraesCS3B01G535700.1	Wheat	cytosol, plastid	44.14	42.79
TraesCS3B01G499200.1	Wheat	cytosol, plastid	45.05	42.55
TraesCS3B01G539300.1	Wheat	cytosol	43.69	41.99
TraesCS3B01G539800.1	Wheat	cytosol	44.14	41.7
TraesCS3B01G571200.1	Wheat	cytosol	42.79	41.48
TraesCS3B01G538500.1	Wheat	cytosol	43.24	41.2
TraesCS3B01G538800.1	Wheat	cytosol	42.79	40.77
TraesCS3B01G536100.1	Wheat	cytosol	42.79	40.77
TraesCS3B01G571100.1	Wheat	cytosol	37.39	40.49
TraesCS3B01G538600.2	Wheat	cytosol	42.34	40.34
TraesCS3B01G539000.1	Wheat	cytosol	41.44	40.17
TraesCS3B01G540100.1	Wheat	cytosol	42.79	39.09
TraesCS1B01G269100.1	Wheat	cytosol	47.75	38.69
TraesCS3B01G538700.1	Wheat	cytosol	38.74	38.39
TraesCS3B01G540200.1	Wheat	cytosol	41.44	38.02
TraesCS5B01G142500.1	Wheat	cytosol	44.14	32.67

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF377
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G244700	EnsemblPlants:TraesCS5B01G244700.1	TIGR:cd03058
TIGR:cd03185	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:426086669..426087433

Molecular Weight (calculated)

25238.4 Da

IEP (calculated)

5.010

GRAVY (calculated)

-0.132

Length

222 amino acids

Sequence
(BLAST)

001: MAEKGVKVFG MWVSPMAIRV EWALWLKGVG YEYVDEDLAN KSDALLRHNP VTKKVPVLVH DGKPIAESTI IVEYIDEAWK DGYPIMPADP YERAQARFWA
101: SFADDKCNAA IYLVFTETGE AQREVVREAQ QCLKTLEKAL EGKKFFGGDT VGYLDVVVGW YTYWLPIIQE VSGTSVVTHE ELPLMKAWFD RFLAVDVVKE
201: TLPPRDKLLA LNKARHEQLL ST

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.