Factsheet for TraesCS3B01G539800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G540100.1	Wheat	cytosol	71.91	69.55
TraesCS3B01G540200.1	Wheat	cytosol	69.79	67.77
TraesCS4B01G274400.1	Wheat	cytosol	65.96	67.1
TraesCS3B01G540700.1	Wheat	cytosol	55.74	66.16
TraesCS3B01G499200.1	Wheat	cytosol, plastid	58.3	58.3
TraesCS3B01G539100.1	Wheat	peroxisome	57.02	58.26
TraesCS3B01G535300.1	Wheat	cytosol	56.6	58.08
TraesCS3B01G539300.1	Wheat	cytosol	57.02	58.01
TraesCS3B01G535700.1	Wheat	cytosol, plastid	55.32	56.77
TraesCS3B01G539000.1	Wheat	cytosol	55.32	56.77
TraesCS3B01G538600.2	Wheat	cytosol	54.89	55.36
TraesCS3B01G538500.1	Wheat	cytosol	54.47	54.94
TraesCS3B01G536100.1	Wheat	cytosol	54.04	54.51
TraesCS3B01G538800.1	Wheat	cytosol	53.62	54.08
TraesCS3B01G571200.1	Wheat	cytosol	50.64	51.97
TraesCS3B01G538700.1	Wheat	cytosol	48.94	51.34
GSMUA_Achr5P07710_001	Banana	cytosol	48.09	50.45
TraesCS3B01G571100.1	Wheat	cytosol	43.83	50.24
TraesCS5B01G244700.1	Wheat	cytosol	41.7	44.14
TraesCS1B01G269100.1	Wheat	cytosol	40.85	35.04
TraesCS5B01G142500.1	Wheat	cytosol	38.3	30.0

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF288
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3B01G539800	EnsemblPlants:TraesCS3B01G539800.1	TIGR:cd03058
TIGR:cd03185	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:778875843..778899456

Molecular Weight (calculated)

26244.8 Da

IEP (calculated)

6.671

GRAVY (calculated)

-0.112

Length

235 amino acids

Sequence
(BLAST)

001: MSEPLKLIGS FGSPVVHRAE VALLLKGVPY EFIQQDLANK SELLLKHNPV HKKVPVLLHG DRPAVCESLV IIEYVDEAFD GPPLLPSDPF ARASACFWAR
101: FVNEKCRRSV WMALWTDGQV QASSAREAAE NLKLLEGQLP EGKRFFGGDT IGFLDIAMGG IAHWLGVFEE MAGARLLTEE DRPLDRPLLC KWARDYKADD
201: IVRQCLPERG RVLAELTARK DRYVSIAMTM AAKNS

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.