Factsheet for TraesCS3B01G539300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G486800.1	Wheat	cytosol	96.1	96.1
TraesCS3B01G535300.1	Wheat	cytosol	76.62	77.29
TraesCS3B01G535700.1	Wheat	cytosol, plastid	75.32	75.98
Zm00001d042095_P001	Maize	cytosol, extracellular	68.4	68.4
EES04222	Sorghum	cytosol	68.83	67.66
TraesCS3B01G539100.1	Wheat	peroxisome	64.94	65.22
TraesCS3B01G540700.1	Wheat	cytosol	55.41	64.65
TraesCS4B01G274400.1	Wheat	cytosol	63.2	63.2
TraesCS3B01G540200.1	Wheat	cytosol	65.37	62.4
TraesCS3B01G499200.1	Wheat	cytosol, plastid	61.47	60.43
TraesCS3B01G540100.1	Wheat	cytosol	62.77	59.67
TraesCS3B01G538600.2	Wheat	cytosol	60.17	59.66
TraesCS3B01G538500.1	Wheat	cytosol	60.17	59.66
TraesCS3B01G538800.1	Wheat	cytosol	59.74	59.23
TraesCS3B01G571200.1	Wheat	cytosol	58.44	58.95
TraesCS3B01G536100.1	Wheat	cytosol	59.31	58.8
TraesCS3B01G539000.1	Wheat	cytosol	58.01	58.52
TraesCS3B01G539800.1	Wheat	cytosol	58.01	57.02
TraesCS3B01G571100.1	Wheat	cytosol	49.78	56.1
TraesCS3B01G538700.1	Wheat	cytosol	54.11	55.8
GSMUA_Achr5P07710_001	Banana	cytosol	48.05	49.55
TraesCS5B01G244700.1	Wheat	cytosol	41.99	43.69
TraesCS1B01G269100.1	Wheat	cytosol	39.39	33.21
TraesCS5B01G142500.1	Wheat	cytosol	38.1	29.33
HORVU3Hr1G107350.6	Barley	mitochondrion	45.02	23.96

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF335
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3B01G539300	EnsemblPlants:TraesCS3B01G539300.1	TIGR:cd03058
TIGR:cd03185	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:778660155..778661037

Molecular Weight (calculated)

25670.1 Da

IEP (calculated)

5.420

GRAVY (calculated)

0.007

Length

231 amino acids

Sequence
(BLAST)

001: MSSPAAAVKV IGAVDSPFSH RAEIALRLKG VPYELIPEDL RNKSELLLAN NPVHKKVPVL LQGDRAVCES LLIVEYVDEA FPGPPLLPAD PYERAMARFW
101: ASFIDGKCSK AYWLALWAEG EAQEGFVKET KENFALLEAQ LEGMRFFGGD AIGLVDIAAC WLAHWLGVFE EVAEVRLATE DEFPRLCRWA KEYVSGEKVR
201: ACLPDRPQLH ARFAANKGMF VAIAKSMLPP K

Best Arabidopsis Sequence Match ( AT1G78370.1 )
(BLAST)

001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL

Arabidopsis Description

GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.