CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 2
mitochondrion 1
plastid 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042095_P001	Maize	cytosol, extracellular	86.38	87.88
TraesCS3D01G482700.1	Wheat	cytosol, plastid	70.21	72.05
TraesCS3B01G535300.1	Wheat	cytosol	70.21	72.05
HORVU3Hr1G106450.1	Barley	cytosol	68.94	70.74
TraesCS3A01G487700.1	Wheat	cytosol, plastid	68.51	70.31
TraesCS3B01G535700.1	Wheat	cytosol, plastid	68.09	69.87
TraesCS3D01G486800.1	Wheat	cytosol	68.51	69.7
TraesCS3B01G539300.1	Wheat	cytosol	67.66	68.83
EES04220	Sorghum	cytosol	60.43	62.56
EES04223	Sorghum	cytosol	62.13	62.13
EES04219	Sorghum	cytosol	60.0	62.11
OQU88198	Sorghum	cytosol	60.0	61.84
OQU88200	Sorghum	cytosol	59.15	59.91
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.3	58.05
KXG34116	Sorghum	cytosol	49.79	57.92
KXG34122	Sorghum	mitochondrion	57.45	55.33
EER88908	Sorghum	cytosol	55.32	54.39
GSMUA_Achr5P07710_001	Banana	cytosol	49.36	51.79
EER96890	Sorghum	cytosol	47.23	50.0
EES19527	Sorghum	cytosol	41.7	37.4
HORVU3Hr1G107350.6	Barley	mitochondrion	42.55	23.04

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8077355	UniProt:C5XHV9	EnsemblPlants:EES04222
ProteinID:EES04222	ProteinID:EES04222.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF288	EnsemblPlantsGene:SORBI_3003G426500	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.131	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A85736	RefSeq:XP_002459102.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:73030119..73031238

Molecular Weight (calculated)

26333.5 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.223

Length

235 amino acids

Sequence
(BLAST)

001: MSGSAAVKVI GFFDSPFSHR AEAALCLKGV PYELIQEKDL RNKSELLLHH NPVHKKVPVL LHGDRRAVCE SLVIVEYVDE AFHGPPLLPA DPADRAAARF
101: WARFIEDKCS TSFWLAMWTE GEVQQGFMRE IKENLKLLEG QVKGKRFFGG DDVGYLDVAA SGFAHWLPVC EEVAGVSVVT AEEYPDLCRW AREYTSHDAV
201: KQCLPDREEL LARFSARKDS FVATARSMAP APEKK

Best Arabidopsis Sequence Match ( AT1G27130.1 )
(BLAST)

001: MAQNDTVKLI GSWSSPYSLR ARVALHLKSV KYEYLDEPDV LKEKSELLLK SNPIHKKVPV LLHGDLSISE SLNVVQYVDE AWPSVPSILP SDAYDRASAR
101: FWAQYIDDKC FAAVDAVVGA KDDEGKMAAV GKLMECLAIL EETFQKSSKG LGFFGGETIG YLDIACSALL GPISVIEAFS GVKFLRQETT PGLIKWAERF
201: RAHEAVKPYM PTVEEVVAFA KQKFNVQ

Arabidopsis Description

GSTU13Glutathione S-transferase U13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.