Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042104_P001 | Maize | cytosol | 84.21 | 84.58 |
| EES04220 | Sorghum | cytosol | 79.39 | 79.74 |
| EES04219 | Sorghum | cytosol | 75.44 | 75.77 |
| KXG34122 | Sorghum | mitochondrion | 71.93 | 67.21 |
| OQU88200 | Sorghum | cytosol | 63.6 | 62.5 |
| EES04223 | Sorghum | cytosol | 63.16 | 61.28 |
| EES04222 | Sorghum | cytosol | 61.84 | 60.0 |
| EES02052 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 60.53 | 58.47 |
| KXG34116 | Sorghum | cytosol | 50.44 | 56.93 |
| EER88908 | Sorghum | cytosol | 58.33 | 55.65 |
| GSMUA_Achr5P07710_001 | Banana | cytosol | 48.25 | 49.11 |
| EER96890 | Sorghum | cytosol | 46.49 | 47.75 |
| EES19527 | Sorghum | cytosol | 42.98 | 37.4 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EntrezGene:8081333 | UniProt:A0A1W0W1C7 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N |
| InterPro:IPR004045 | InterPro:IPR010987 | EnsemblPlants:OQU88198 | ProteinID:OQU88198 | ProteinID:OQU88198.1 | PFAM:PF13410 |
| PFAM:PF13417 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF492 | EnsemblPlantsGene:SORBI_3003G425850 |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001A84B43 | RefSeq:XP_002456930.1 | : |
Description
hypothetical protein
Coordinates
chr3:+:73006557..73007918
Molecular Weight (calculated)
25679.8 Da
IEP (calculated)
4.864
GRAVY (calculated)
-0.136
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPVKIIGH YASPFSHRVE AALQLKGVPY ELIQEDLSNK SELLLTKNPV HKKVPVLLHG DLAVCESLVI VEYIDEAFDG PAILPADPYD RAMARFWTNF
101: IDTKFFQPFW LAHWAEGEAQ KAVVKEAKEN LALLEAQLDG KRFFGGDTPG YLDIAACALG PWIGVLEEVT GVTLVDGNEF PSLFQWAKEY YNSSEALKPC
201: LPDKDRLVAY FTENKEKYRM MAKTILQQ
101: IDTKFFQPFW LAHWAEGEAQ KAVVKEAKEN LALLEAQLDG KRFFGGDTPG YLDIAACALG PWIGVLEEVT GVTLVDGNEF PSLFQWAKEY YNSSEALKPC
201: LPDKDRLVAY FTENKEKYRM MAKTILQQ
001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN
Arabidopsis Description
GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.