Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88198 | Sorghum | cytosol | 79.74 | 79.39 |
| EES04219 | Sorghum | cytosol | 74.45 | 74.45 |
| KXG34122 | Sorghum | mitochondrion | 70.48 | 65.57 |
| EES04222 | Sorghum | cytosol | 62.56 | 60.43 |
| EES04223 | Sorghum | cytosol | 61.23 | 59.15 |
| EES02052 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 60.79 | 58.47 |
| OQU88200 | Sorghum | cytosol | 58.59 | 57.33 |
| KXG34116 | Sorghum | cytosol | 46.7 | 52.48 |
| EER88908 | Sorghum | cytosol | 54.63 | 51.88 |
| EER96890 | Sorghum | cytosol | 47.14 | 48.2 |
| GSMUA_Achr5P07710_001 | Banana | cytosol | 46.26 | 46.88 |
| EES19527 | Sorghum | cytosol | 44.49 | 38.55 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EntrezGene:8062323 | UniProt:C5XHV5 | ncoils:Coil |
| EnsemblPlants:EES04220 | ProteinID:EES04220 | ProteinID:EES04220.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 |
| InterPro:IPR010987 | PFAM:PF13410 | PFAM:PF13417 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 |
| PANTHER:PTHR11260:SF492 | EnsemblPlantsGene:SORBI_3003G426100 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001A85734 |
| RefSeq:XP_002459100.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:73017034..73018103
Molecular Weight (calculated)
25555.7 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.159
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPVKVISH YASPFGHRVE AALRLKGVPY ELVQEDLNNK SELLVASNPV HKKVPVLLHG DLAVCESLVI VQYVDDAFDG PSLLPADPYD RAMARFWVDF
101: MENKCSKSFW LAHWAEGEAQ KAMVKEAKEN LTLLEAQLDG KRFFGGDTAG YVDIAVSALG PWLSVLEEVT ELTLVDAKEF PALCQWSKEY SSNEALKPCL
201: PDRDRLVAYF TENKEMYKMF AKTMLQH
101: MENKCSKSFW LAHWAEGEAQ KAMVKEAKEN LTLLEAQLDG KRFFGGDTAG YVDIAVSALG PWLSVLEEVT ELTLVDAKEF PALCQWSKEY SSNEALKPCL
201: PDRDRLVAYF TENKEMYKMF AKTMLQH
001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
Arabidopsis Description
GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.