CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042098_P001	Maize	cytosol	78.28	84.51
EES04219	Sorghum	cytosol	76.64	82.38
OQU88198	Sorghum	cytosol	67.21	71.93
EES04220	Sorghum	cytosol	65.57	70.48
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.61	60.59
OQU88200	Sorghum	cytosol	55.33	58.19
EES04222	Sorghum	cytosol	55.33	57.45
EES04223	Sorghum	cytosol	55.33	57.45
KXG34116	Sorghum	cytosol	46.72	56.44
EER88908	Sorghum	cytosol	50.82	51.88
GSMUA_Achr5P07710_001	Banana	cytosol	45.08	49.11
EER96890	Sorghum	cytosol	41.8	45.95
EES19527	Sorghum	cytosol	36.89	34.35

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A1B6Q878	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EnsemblPlants:KXG34122	ProteinID:KXG34122	ProteinID:KXG34122.1	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF492	EnsemblPlantsGene:SORBI_3003G426300	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00081ADCE6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:73024820..73025894

Molecular Weight (calculated)

27941.9 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.189

Length

244 amino acids

Sequence
(BLAST)

001: MVRCFSKKTA SSQKNQRNMS PPVKVLGHLT SAFAHRVEAA LRLKGVPYEL IREDLSNKSE LLLANNPVHK TVPVLLHGDQ AICESLVIVE YIDEVFDGPP
101: LLPADPYDRA MVRFWADFMD KLFVPFWMAH WVEGEAQKTL VEEVKQKLAL LEAQLKGKRF FGGDTIGYID IAACVLGPWL SMVEEVTGVV VLDEDEYPAL
201: RRWSKEYSSY EALKQCIPDR DQLVAFYTER KENYKMMAKA WLKQ

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.