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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020780_P001 Maize extracellular 92.79 92.79
TraesCS5D01G254000.1 Wheat cytosol 83.33 83.71
Os09t0467200-01 Rice plastid 81.98 81.61
TraesCS5B01G244700.1 Wheat cytosol 81.53 81.53
TraesCS5A01G247500.2 Wheat cytosol 65.77 78.07
KRH62274 Soybean extracellular 28.83 62.14
VIT_08s0040g00920.t01 Wine grape cytosol 50.9 49.78
KRH52989 Soybean cytosol 34.23 48.72
EES04222 Sorghum cytosol 50.0 47.23
EES04220 Sorghum cytosol 48.2 47.14
VIT_18s0001g07010.t01 Wine grape cytosol 36.94 47.13
Solyc01g081310.2.1 Tomato cytosol 47.75 47.11
PGSC0003DMT400004531 Potato cytosol 47.3 46.67
OQU88198 Sorghum cytosol 47.75 46.49
EES04219 Sorghum cytosol 45.95 44.93
KXG34116 Sorghum cytosol 38.74 42.57
KRH62275 Soybean cytosol 21.62 42.48
OQU88200 Sorghum cytosol 44.14 42.24
KXG34122 Sorghum mitochondrion 45.95 41.8
EES04223 Sorghum cytosol 44.14 41.7
EER88908 Sorghum cytosol 43.69 40.59
EES19527 Sorghum cytosol 47.75 40.46
EES02052 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.34 39.83
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EntrezGene:8083252UniProt:C5X303EnsemblPlants:EER96890
ProteinID:EER96890ProteinID:EER96890.1GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006749
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009987GO:GO:0016740
GO:GO:0019748InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987
PFAM:PF02798PFAM:PF13410PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF377
EnsemblPlantsGene:SORBI_3002G231600SUPFAM:SSF47616SUPFAM:SSF52833unigene:Sbi.7830InterPro:Thioredoxin-like_sfUniParc:UPI0001A83694
RefSeq:XP_002460369.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:62299797..62301505
Molecular Weight (calculated)
24920.1 Da
IEP (calculated)
5.183
GRAVY (calculated)
-0.090
Length
222 amino acids
Sequence
(BLAST)
001: MAEKGVKVLG MWASPMVIRV EWALRLKGVE YEYVDEDLAN KSADLLRYNP VTKKVPVLVH DGNPIAESTI IVEYIDEAWK GGYPIMPADP YERAQARFWA
101: RFAEEKCNAA LYPIFTATGE AQRKAVQEAQ QCLKTLETAL EGKKFFGGDA VGYLDIVVGW YAHWLPVMEE VIGAGVVTDK ELPLMKAWFD RFLAVDVVKA
201: ALPDRDRLLA ANKARRDQLL SA
Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)
001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA
Arabidopsis Description
GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.