CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042102_P001	Maize	cytosol	78.45	89.66
Os01t0949750-00	Rice	cytosol	62.5	66.51
OQU88198	Sorghum	cytosol	62.5	63.6
EES04219	Sorghum	cytosol	60.78	62.11
HORVU3Hr1G111150.1	Barley	cytosol	60.78	61.84
TraesCS3D01G512200.1	Wheat	cytosol	60.78	61.84
TraesCS3B01G571200.1	Wheat	cytosol	60.34	61.14
TraesCS3B01G571100.1	Wheat	cytosol	53.88	60.98
KXG34116	Sorghum	cytosol	53.02	60.89
EES04222	Sorghum	cytosol	59.91	59.15
EES04220	Sorghum	cytosol	57.33	58.59
EES04223	Sorghum	cytosol	59.05	58.3
EER88908	Sorghum	cytosol	58.19	56.49
KXG34122	Sorghum	mitochondrion	58.19	55.33
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.17	54.24
GSMUA_Achr5P07710_001	Banana	cytosol	47.41	49.11
EER96890	Sorghum	cytosol	42.24	44.14
EES19527	Sorghum	cytosol	39.22	34.73

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A1W0W1E4	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EnsemblPlants:OQU88200	ProteinID:OQU88200	ProteinID:OQU88200.1	PFAM:PF00043	PFAM:PF13417
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF492	EnsemblPlantsGene:SORBI_3003G426200	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0009DC9396	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:73019107..73020239

Molecular Weight (calculated)

26023.3 Da

IEP (calculated)

6.257

GRAVY (calculated)

-0.043

Length

232 amino acids

Sequence
(BLAST)

001: MATTEPAAVR LIGSFASPFV HRAEVALRLK GVPYELILED LSNKSELLLQ HNPVHKLVPV LLHGDRAISE SLVVVEYVDE AFDGPPLLPA APHARADARF
101: WANFIDQKFA RPFWMSFWTD DEERKKAFAK EAKENLALVE AQLKGRRFFG GDAIGFVDIA ACGLAHWVGV IEEVTGVTLV NGEEFPALRE WADAYVNDAT
201: VKQCLRSRDE LVAYFSARKE MYLLRARAAL RK

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.