CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 4
vacuole 3
plastid 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042096_P001	Maize	extracellular	90.68	91.06
EES04219	Sorghum	cytosol	60.59	63.0
EES04220	Sorghum	cytosol	58.47	60.79
OQU88198	Sorghum	cytosol	58.47	60.53
KXG34122	Sorghum	mitochondrion	60.59	58.61
EES04222	Sorghum	cytosol	58.05	58.3
EES04223	Sorghum	cytosol	55.93	56.17
OQU88200	Sorghum	cytosol	54.24	55.17
KXG34116	Sorghum	cytosol	44.92	52.48
EER88908	Sorghum	cytosol	50.85	50.21
GSMUA_Achr5P07710_001	Banana	cytosol	42.37	44.64
EER96890	Sorghum	cytosol	39.83	42.34
EES19527	Sorghum	cytosol	36.86	33.21

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8081335	UniProt:C5XHV8	EnsemblPlants:EES02052
ProteinID:EES02052	ProteinID:EES02052.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF288	EnsemblPlantsGene:SORBI_3003G426400	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.2865	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A84BA3	RefSeq:XP_002456932.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:73026407..73027878

Molecular Weight (calculated)

26597.7 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.198

Length

236 amino acids

Sequence
(BLAST)

001: MSSPPPPPVK LIGFFGSPYA FRAEAALCLK GVPYELILED LFGTKSDLLL HHNPVHKKVP VLLHGDDRAI SESLVIAEYV DEVFDGPPLL PADPYDRATA
101: RFWADFIENK LTKPFFMAIW VEESEARLRF EKEAKELVAL LEAQLDGKKF FAGDRAGYLD VAASSLGPWR SVIEELNGVT VLSEDEHPNL CRWSRDYCAC
201: EDLKPCMPDR EKLLAYFTKN FDRYKAAVNA TLSQSQ

Best Arabidopsis Sequence Match ( AT2G29470.1 )
(BLAST)

001: MAEKEEGVKL IGSWASPFSR RVEMALKLKG VPYDYLDEDY LVVKSPLLLQ LNPVYKKVPV LVHNGKILPE SQLILEYIDQ TWTNNPILPQ SPYDKAMARF
101: WAKFVDEQVT MIGLRSLVKS EKRIDVAIEE VQELIMLLEN QITGKKLFGG ETIGFLDMVV GSMIPFCLAR AWEGMGIDMI PEEKFPELNR WIKNLKEIEI
201: VRECIPDREK HIEHMMKIVG RIKAV

Arabidopsis Description

GSTU3Glutathione S-transferase U3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.