CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 2
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G021900.1	Wheat	cytosol	65.96	67.98
TraesCS4A01G469800.1	Wheat	cytosol	53.19	67.2
HORVU7Hr1G002370.2	Barley	cytosol	64.68	66.38
EES04219	Sorghum	cytosol	61.28	63.44
OQU88198	Sorghum	cytosol	61.28	63.16
TraesCS7D01G019400.1	Wheat	cytosol	45.11	63.1
EES04222	Sorghum	cytosol	62.13	62.13
EES04220	Sorghum	cytosol	59.15	61.23
TraesCS3B01G539100.1	Wheat	peroxisome	59.57	60.87
TraesCS3D01G487300.1	Wheat	peroxisome	58.72	60.0
OQU88200	Sorghum	cytosol	58.3	59.05
HORVU7Hr1G002720.1	Barley	cytosol	61.28	58.78
KXG34116	Sorghum	cytosol	49.79	57.92
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.17	55.93
KXG34122	Sorghum	mitochondrion	57.45	55.33
HORVU3Hr1G107170.1	Barley	cytosol	59.57	51.66
EER88908	Sorghum	cytosol	51.49	50.63
GSMUA_Achr5P07710_001	Banana	cytosol	42.55	44.64
EER96890	Sorghum	cytosol	41.7	44.14
EES19527	Sorghum	cytosol	42.13	37.79
Os01t0949800-01	Rice	cytosol	25.11	25.54
Os01t0950000-01	Rice	cytosol, mitochondrion	6.38	6.58

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8062326	UniProt:C5XHW0	EnsemblPlants:EES04223
ProteinID:EES04223	ProteinID:EES04223.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF335
EnsemblPlantsGene:SORBI_3003G426600	SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.19938	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A85737
RefSeq:XP_002459103.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:73031515..73032877

Molecular Weight (calculated)

26454.8 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.269

Length

235 amino acids

Sequence
(BLAST)

001: MSSSPPIKLI GHFASPFVHR AAAALRLKGV PYEFIQEDME NKGELLLRHN PIHKKVPVLL HGHRAVCESL VIVEYVDEAF DGPPLLPADP YDRAMARFWA
101: HFMDTKCRTP LVLSFLTEGE QQEGFLKETK ENLALLETQL DGKRFFGGDS VGYLDIALSG MSHWMAAFEE MTGVSLLADD DFPTLRRWAK EYSSNEDVKQ
201: CLPSIEHLKA HFSATAKKDK VKAVATAMLQ QQQQQ

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.