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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • vacuole 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, vacuole
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G539100.1 Wheat peroxisome 79.34 93.48
TraesCS3D01G487300.1 Wheat peroxisome 78.97 93.04
HORVU7Hr1G002370.2 Barley cytosol 57.2 67.69
HORVU7Hr1G002720.1 Barley cytosol 58.3 64.49
HORVU3Hr1G106450.1 Barley cytosol 52.77 62.45
EES04223 Sorghum cytosol 51.66 59.57
HORVU3Hr1G111150.1 Barley cytosol 46.86 55.7
HORVU3Hr1G107180.1 Barley cytosol 51.66 55.56
HORVU3Hr1G107160.1 Barley cytosol 45.76 54.87
HORVU0Hr1G019300.1 Barley cytosol 47.6 50.19
GSMUA_Achr5P07710_001 Banana cytosol 38.75 46.88
Os01t0949800-01 Rice cytosol 23.62 27.71
HORVU1Hr1G064890.1 Barley cytosol 35.06 27.46
HORVU5Hr1G045850.3 Barley cytosol 31.0 24.93
HORVU3Hr1G107350.6 Barley mitochondrion 32.1 20.05
Os01t0950000-01 Rice cytosol, mitochondrion 4.8 5.7
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NEnsemblPlantsGene:HORVU3Hr1G107170EnsemblPlants:HORVU3Hr1G107170.1
InterPro:IPR004045InterPro:IPR010987UniProt:M0V6R0PFAM:PF00043PFAM:PF13417PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF335SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI00029511ACSEG:seg::::
Description
No Description!
Coordinates
chrchr3H:+:672555204..672557197
Molecular Weight (calculated)
29860.3 Da
IEP (calculated)
6.423
GRAVY (calculated)
0.094
Length
271 amino acids
Sequence
(BLAST)
001: MLVRSLLDIK RHQHHLDQSV PIRPINVDIQ ASLAPLASLS AMAEPVKLIG AFGSPFVHRA EVALRLKGVP FELILEDLNN KSELLLKHNP IHKTVPVLLH
101: GDRPAVLESL LIVEYVDEAF DGPPLLPVDT YGRAMARFWA QFIEQKCSRP FWMAVWMDDG EAREGFVRET KANLALLEAR LQGKRFFAGD AVGYLDLAAC
201: GLSHLLGVIE DVAGASLVDA GEFPALRRWA EDYVSDATVS ACLPPREQLA AHFAGKKDRI KLAVNAMMQG A
Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)
001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
Arabidopsis Description
GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.