Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • plastid 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018220_P001 Maize cytosol 76.57 76.89
TraesCS7A01G083700.1 Wheat cytosol 76.15 75.21
TraesCS7D01G078700.1 Wheat cytosol 74.9 74.9
TraesCSU01G234300.1 Wheat cytosol 74.48 73.86
HORVU0Hr1G019300.1 Barley cytosol 74.9 69.65
OQU88198 Sorghum cytosol 55.65 58.33
OQU88200 Sorghum cytosol 56.49 58.19
EES04219 Sorghum cytosol 54.81 57.71
KXG34116 Sorghum cytosol 47.28 55.94
EES04222 Sorghum cytosol 54.39 55.32
EES04220 Sorghum cytosol 51.88 54.63
EES04223 Sorghum cytosol 50.63 51.49
EES02052 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 50.21 50.85
KXG34122 Sorghum mitochondrion 51.88 50.82
GSMUA_Achr5P07710_001 Banana cytosol 45.19 48.21
EER96890 Sorghum cytosol 40.59 43.69
EES19527 Sorghum cytosol 36.4 33.21
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10UniProt:C5Z977EnsemblPlants:EER88908ProteinID:EER88908
ProteinID:EER88908.1GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006749GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009987GO:GO:0016740GO:GO:0019748
InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987
PFAM:PF00043PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF335
EnsemblPlantsGene:SORBI_3010G252800SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI0001A89149RefSeq:XP_002437541.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:59175467..59176186
Molecular Weight (calculated)
26353.5 Da
IEP (calculated)
6.094
GRAVY (calculated)
0.066
Length
239 amino acids
Sequence
(BLAST)
001: MSQPPEPVKL ITAFGSPFAH RVEVALALKG VPYELLVEDL SAKSDLLLTH NPIHRSVPVL LHAGRAVCES LLIVEYVDEA FPASASHGDV VRILPADPYA
101: RATARFWADF VATKCLKPLW LSMWTADGEA RARFAAETKA SLAVLDAELR GRGTRFFGGD DLGFVDLAAC TLAHWLGVLE EVAGVRLVAE GEYPSLRRWA
201: DEYTSHEVVR RSLPDRDQLV AFFAANKERY RSMVDAAVH
Best Arabidopsis Sequence Match ( AT1G27130.1 )
(BLAST)
001: MAQNDTVKLI GSWSSPYSLR ARVALHLKSV KYEYLDEPDV LKEKSELLLK SNPIHKKVPV LLHGDLSISE SLNVVQYVDE AWPSVPSILP SDAYDRASAR
101: FWAQYIDDKC FAAVDAVVGA KDDEGKMAAV GKLMECLAIL EETFQKSSKG LGFFGGETIG YLDIACSALL GPISVIEAFS GVKFLRQETT PGLIKWAERF
201: RAHEAVKPYM PTVEEVVAFA KQKFNVQ
Arabidopsis Description
GSTU13Glutathione S-transferase U13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.