Factsheet for Zm00001d018220_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G078700.1	Wheat	cytosol	79.83	79.5
TraesCS7A01G083700.1	Wheat	cytosol	79.83	78.51
TraesCSU01G234300.1	Wheat	cytosol	78.57	77.59
EER88908	Sorghum	cytosol	76.89	76.57
HORVU0Hr1G019300.1	Barley	cytosol	77.31	71.6
Zm00001d042104_P001	Maize	cytosol	59.66	62.56
Zm00001d042098_P001	Maize	cytosol	59.24	62.39
Zm00001d042099_P001	Maize	cytosol, plastid	59.24	61.84
Zm00001d042102_P001	Maize	cytosol	52.1	61.08
Zm00001d042095_P001	Maize	cytosol, extracellular	58.4	60.17
Zm00001d042096_P001	Maize	extracellular	54.2	54.89
GSMUA_Achr5P07710_001	Banana	cytosol	45.8	48.66
Zm00001d020780_P001	Maize	extracellular	42.44	45.5
Zm00001d052384_P001	Maize	cytosol	23.95	38.51
Zm00001d038192_P001	Maize	cytosol, mitochondrion	36.97	32.96

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:541837	EMBL:AF244689	ProteinID:AQK75298.1
EMBL:BT062934	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF335	UniProt:Q9FQB5	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00000A3F7F
EnsemblPlantsGene:Zm00001d018220	EnsemblPlants:Zm00001d018220_P001	EnsemblPlants:Zm00001d018220_T001	:	:	:

Description

glutathione transferase24 glutathione transferase24

Coordinates

chr5:-:216862591..216863616

Molecular Weight (calculated)

26453.5 Da

IEP (calculated)

5.338

GRAVY (calculated)

-0.040

Length

238 amino acids

Sequence
(BLAST)

001: MSSPQSAAPP VKLITAFGSP FAHRVEVALA LKGVPYELVV EDLANKSELL LTHNPVHQSV PVLLHGDRAV CESLVIVEYV DETFHHGAAP GILPADPYDR
101: ATARFWADFI DNKCLKPMWL SMWTDGEAQA RFVRETKESL GVLDAQLQGK RFFAGDALGF VDLAACTLAH WLGVLEEVAG VHLIAADGEY PALRRWAKEY
201: VSDEVVSRSL PDRDELVAFF TASKERYKSW VRAEVERH

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.