Factsheet for Zm00001d042096_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02052	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.06	90.68
Zm00001d042104_P001	Maize	cytosol	62.98	65.2
Zm00001d042098_P001	Maize	cytosol	61.28	63.72
Zm00001d042099_P001	Maize	cytosol, plastid	60.0	61.84
Zm00001d042102_P001	Maize	cytosol	51.49	59.61
Zm00001d042095_P001	Maize	cytosol, extracellular	57.45	58.44
Zm00001d018220_P001	Maize	cytosol	54.89	54.2
GSMUA_Achr5P07710_001	Banana	cytosol	42.98	45.09
Zm00001d020780_P001	Maize	extracellular	38.3	40.54
Zm00001d052384_P001	Maize	cytosol	21.28	33.78
Zm00001d038192_P001	Maize	cytosol, mitochondrion	37.87	33.33

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:B4FSR6	EMBL:BT040154	EMBL:EU961649
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
ProteinID:ONM34542.1	PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF288	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00017B79C0	EnsemblPlantsGene:Zm00001d042096
EnsemblPlants:Zm00001d042096_P001	EnsemblPlants:Zm00001d042096_T001	SEG:seg	:	:	:

Description

glutathione transferase21Glutathione S-transferase U16

Coordinates

chr3:-:150586826..150587533

Molecular Weight (calculated)

26492.7 Da

IEP (calculated)

5.041

GRAVY (calculated)

-0.142

Length

235 amino acids

Sequence
(BLAST)

001: MSSPPPVKLI GFFGSPYAFR AEAALCLKGV PYELILEDLF GSKSELLLHH NPVHKKVPVL LHGDGRAISE SLVIAEYVDE AFDGPPLLPA DPYARAAARF
101: WADFIETRLT KPFFMAIWVE EREARLRFEE EAKELVALLE AQLEGKRFFA GDRPGYLDVA ASALGPWRSV IEELNGVALL SEDDHPNLCR WTRDYCAFEA
201: LKPCMPDREK LLAYFTKNFD RYKAAVNATL SQSQQ

Best Arabidopsis Sequence Match ( AT2G29470.1 )
(BLAST)

001: MAEKEEGVKL IGSWASPFSR RVEMALKLKG VPYDYLDEDY LVVKSPLLLQ LNPVYKKVPV LVHNGKILPE SQLILEYIDQ TWTNNPILPQ SPYDKAMARF
101: WAKFVDEQVT MIGLRSLVKS EKRIDVAIEE VQELIMLLEN QITGKKLFGG ETIGFLDMVV GSMIPFCLAR AWEGMGIDMI PEEKFPELNR WIKNLKEIEI
201: VRECIPDREK HIEHMMKIVG RIKAV

Arabidopsis Description

GSTU3Glutathione S-transferase U3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.