Factsheet for Zm00001d042102_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88200	Sorghum	cytosol	89.66	78.45
Os01t0949750-00	Rice	cytosol	62.56	58.26
HORVU3Hr1G111150.1	Barley	cytosol	63.05	56.14
TraesCS3D01G512200.1	Wheat	cytosol	63.05	56.14
TraesCS3B01G571200.1	Wheat	cytosol	62.56	55.46
TraesCS3B01G571100.1	Wheat	cytosol	55.66	55.12
Zm00001d042104_P001	Maize	cytosol	61.58	55.07
Zm00001d042099_P001	Maize	cytosol, plastid	61.08	54.39
Zm00001d042098_P001	Maize	cytosol	59.11	53.1
Zm00001d042095_P001	Maize	cytosol, extracellular	60.1	52.81
Zm00001d018220_P001	Maize	cytosol	61.08	52.1
Zm00001d042096_P001	Maize	extracellular	59.61	51.49
GSMUA_Achr5P07710_001	Banana	cytosol	50.25	45.54
Zm00001d020780_P001	Maize	extracellular	44.34	40.54
Zm00001d052384_P001	Maize	cytosol	26.11	35.81
Zm00001d038192_P001	Maize	cytosol, mitochondrion	43.35	32.96

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:541840	UniProt:B8A2B5	EMBL:BT055707
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	ProteinID:ONM34549.1	PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF492	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001917650
EnsemblPlantsGene:Zm00001d042102	EnsemblPlants:Zm00001d042102_P001	EnsemblPlants:Zm00001d042102_T001	SEG:seg	:	:

Description

glutathione transferase28 glutathione transferase28

Coordinates

chr3:+:150720597..150721538

Molecular Weight (calculated)

22470.9 Da

IEP (calculated)

4.672

GRAVY (calculated)

0.086

Length

203 amino acids

Sequence
(BLAST)

001: MATTEPAAVR LVGSFASPFV HRAEVALRLK GVPYELILED LANKSELLLA HNPVHKLVPV LLHGDRAISE SLVILEYVDE AFDGPPLLPA EPHARADARF
101: WAHFIDQKFA RPFWMSFWTD DEERREAMAK EAKENLALLE AQLRGQRFFG GEAIGFVDIA ACALAHWVGV IEEAAGVVLV GGEEFPALRE WADAYINDAT
201: VKA

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.