Factsheet for VIT_05s0049g01100.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 4
vacuole 3
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	96.48	96.48
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	96.48	96.48
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	95.59	95.59
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	95.59	90.8
KRH59021	Soybean	cytosol, nucleus	64.76	65.62
VIT_06s0004g05710.t01	Wine grape	cytosol	21.59	62.82
VIT_06s0004g05680.t01	Wine grape	cytosol	29.07	60.55
KRH59020	Soybean	cytosol	60.35	59.83
KRH59018	Soybean	cytosol	56.83	59.45
KRH59019	Soybean	cytosol	58.59	59.38
KRH42903	Soybean	cytosol	58.15	57.89
VIT_17s0000g06120.t01	Wine grape	cytosol	27.75	57.27
KRH42902	Soybean	cytosol	55.95	56.19
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	46.7	53.0
VIT_15s0024g01630.t01	Wine grape	cytosol	48.02	51.42
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	48.9	50.68
VIT_05s0051g00110.t01	Wine grape	cytosol	49.78	50.45
VIT_15s0024g01650.t01	Wine grape	cytosol	48.9	49.33
VIT_17s0000g02920.t01	Wine grape	extracellular	47.14	48.42
VIT_15s0024g01540.t01	Wine grape	cytosol	48.46	48.25
VIT_07s0005g04880.t01	Wine grape	cytosol	47.14	48.2
KRH42905	Soybean	cytosol	60.35	48.07
VIT_07s0005g04870.t01	Wine grape	cytosol	48.02	48.02
VIT_17s0000g02930.t01	Wine grape	cytosol	47.58	48.0
VIT_07s0005g04890.t01	Wine grape	cytosol	47.14	47.98
VIT_17s0000g02950.t01	Wine grape	cytosol	47.14	47.56
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	47.14	47.56
VIT_00s0153g00070.t01	Wine grape	cytosol	48.02	47.19
VIT_08s0007g01400.t01	Wine grape	cytosol	45.81	47.06
VIT_08s0007g01410.t01	Wine grape	cytosol	45.37	46.61
VIT_08s0007g01420.t01	Wine grape	cytosol	43.61	45.41
VIT_08s0040g00920.t01	Wine grape	cytosol	45.37	45.37
VIT_16s0039g00970.t01	Wine grape	cytosol	46.7	44.92
VIT_16s0039g00990.t01	Wine grape	cytosol	45.37	43.64
VIT_16s0039g01070.t01	Wine grape	cytosol	44.93	43.22
VIT_06s0004g05700.t01	Wine grape	cytosol	41.85	43.18
VIT_18s0001g07010.t01	Wine grape	cytosol	33.04	43.1
VIT_17s0000g02940.t01	Wine grape	cytosol	32.6	41.81
VIT_17s0000g06130.t01	Wine grape	cytosol	41.41	41.41
VIT_14s0060g02170.t01	Wine grape	cytosol	41.41	40.69
VIT_17s0000g06140.t01	Wine grape	cytosol	40.97	40.26
VIT_17s0000g06110.t01	Wine grape	cytosol	41.41	39.83
VIT_18s0072g00320.t01	Wine grape	cytosol	48.9	39.64
VIT_01s0026g02400.t01	Wine grape	cytosol	38.77	38.77
VIT_01s0026g02370.t01	Wine grape	cytosol	38.33	38.16
VIT_01s0026g02390.t01	Wine grape	cytosol	37.89	37.72
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	42.29	35.56
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	21.15	28.4
VIT_06s0004g05670.t01	Wine grape	cytosol	42.73	27.56

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100251134	wikigene:100251134	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB48585
ProteinID:CCB48585.1	UniProt:F6H8N9	EMBL:FN595496	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EntrezGene:LOC100251134	wikigene:LOC100251134	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF474	SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC61062	InterPro:Thioredoxin-like_sf
UniParc:UPI00015C7439	ArrayExpress:VIT_05s0049g01100	EnsemblPlantsGene:VIT_05s0049g01100	EnsemblPlants:VIT_05s0049g01100.t01	RefSeq:XP_002285214	RefSeq:XP_002285214.1

Description

No Description!

Coordinates

chr5:+:8146884..8147830

Molecular Weight (calculated)

26564.3 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.101

Length

227 amino acids

Sequence
(BLAST)

001: MAQQEVKLLG FWASPFAYRV IWALKLKGVD YEYIEEDVFN KSPLLLQLNP LHKRVPVLIH GHRVICESYV IVQYIDETWP QYPLLPQHPY ERAMARFWAE
101: FAESKLFESA WMALCSRGEE RERAAKLAME AVEKIEELVK GKKLFGGESI GYLDICLGWI SYWLPIWEEV GCMQIIDPIK FPATSSWIDT VLHHPVIRDN
201: LPAREAMIVY FQKRSKDIYE SRTGLRV

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.