CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59019	Soybean	cytosol	76.04	73.66
KRH42903	Soybean	cytosol	76.96	73.25
KRH59021	Soybean	cytosol, nucleus	75.58	73.21
KRH59020	Soybean	cytosol	75.12	71.18
KRH42902	Soybean	cytosol	66.82	64.16
KRH42905	Soybean	cytosol	77.42	58.95
KRH62274	Soybean	extracellular	27.19	57.28
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	59.45	56.83
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	59.45	56.83
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	58.99	56.39
KRH49219	Soybean	cytosol	25.35	55.56
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	58.06	55.51
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	57.6	52.3
KRG90592	Soybean	cytosol	50.23	49.1
KRH54547	Soybean	cytosol	25.81	48.7
KRH52989	Soybean	cytosol	34.56	48.08
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	44.24	48.0
KRH72040	Soybean	cytosol	49.77	48.0
KRH49221	Soybean	cytosol, extracellular	48.39	46.67
KRH62422	Soybean	cytosol	47.0	46.36
KRH49216	Soybean	cytosol	47.93	46.22
KRH75749	Soybean	cytosol	46.54	46.12
KRH00075	Soybean	cytosol	47.47	45.78
KRH19667	Soybean	endoplasmic reticulum, extracellular	47.0	45.74
KRH49222	Soybean	cytosol	41.94	45.73
KRH49212	Soybean	cytosol, nucleus	47.47	45.58
KRH49224	Soybean	cytosol	47.0	45.33
KRH49213	Soybean	cytosol, endoplasmic reticulum	47.0	45.33
KRH00071	Soybean	nucleus	46.54	44.89
KRH49214	Soybean	cytosol	46.08	44.44
KRH75750	Soybean	cytosol, nucleus	46.08	44.25
KRH00072	Soybean	cytosol	44.7	43.69
KRH62423	Soybean	cytosol	45.16	43.36
KRH49215	Soybean	cytosol, nucleus	45.62	43.23
KRH17938	Soybean	cytosol	30.41	42.58
KRH49218	Soybean	cytosol	43.32	42.53
KRH34584	Soybean	cytosol	43.32	42.15
KRH54548	Soybean	cytosol	42.86	39.57
KRH62275	Soybean	cytosol	18.89	36.28
KRG92200	Soybean	extracellular	37.79	33.2

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100795880	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A0B5EC24	EMBL:ACUP02003299
ncoils:Coil	EnsemblPlantsGene:GLYMA_05G161300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EMBL:KM818435	EnsemblPlants:KRH59018	ProteinID:KRH59018	ProteinID:KRH59018.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF474	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000189D75A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:35302140..35303410

Molecular Weight (calculated)

25537.1 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.364

Length

217 amino acids

Sequence
(BLAST)

001: MGSEDRVKLV NFWASPFGKR VEWALKLKGV KYEYIEEDVY NMSSLVMELN PVHKKVPILV HAQKPIAESF TILEYIDETW KQYPLLPQDP YQRALARFWA
101: NFGEQKLMRA ARKAMTTSRD ERAKALKETR ELMERIEEEI KGKKYFGGDN IGFLDIALGW ISYWLPVVEE VGSMHIIDPL KFPAITSWMT NFLSHRVIKD
201: NLPPRDKMLV YYRNFVN

Best Arabidopsis Sequence Match ( AT2G29440.1 )
(BLAST)

001: MGKNEEVKLL GIWASPFSRR IEMALKLKGV PYEYLEEDLE NKSSLLLALS PIHKKIPVLV HNGKTIIESH VILEYIDETW KHNPILPQDP FQRSKARVLA
101: KLVDEKIVNV GFASLAKTEK GREVLIEQTR ELIMCLEKEL AGKDYFGGKT VGFLDFVAGS MIPFCLERAW EGMGVEMITE KKFPEYNKWV KKLKEVEIVV
201: DCIPLREKHI EHMNNMAEKI RSA

Arabidopsis Description

GSTU6GSTU6 [Source:UniProtKB/TrEMBL;Acc:A0A178VUQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.