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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH49214 Soybean cytosol 96.89 96.89
KRH49215 Soybean cytosol, nucleus 93.78 92.14
KRH00071 Soybean nucleus 88.89 88.89
KRH49216 Soybean cytosol 85.33 85.33
KRH49212 Soybean cytosol, nucleus 84.89 84.51
KRH49219 Soybean cytosol 36.89 83.84
KRH00075 Soybean cytosol 83.11 83.11
KRH49221 Soybean cytosol, extracellular 81.78 81.78
KRH49224 Soybean cytosol 80.0 80.0
KRH49222 Soybean cytosol 68.0 76.88
KRH00072 Soybean cytosol 74.67 75.68
KRH49218 Soybean cytosol 73.33 74.66
KRH17938 Soybean cytosol 50.22 72.9
KRH75749 Soybean cytosol 65.78 67.58
KRH62422 Soybean cytosol 65.78 67.27
KRH62423 Soybean cytosol 64.44 64.16
KRH75750 Soybean cytosol, nucleus 63.56 63.27
KRH62274 Soybean extracellular 28.44 62.14
KRH54547 Soybean cytosol 28.44 55.65
KRH72040 Soybean cytosol 49.33 49.33
KRH59021 Soybean cytosol, nucleus 48.89 49.11
KRH52989 Soybean cytosol 33.78 48.72
KRH59018 Soybean cytosol 45.33 47.0
KRH42903 Soybean cytosol 47.56 46.93
KRH59020 Soybean cytosol 47.56 46.72
KRH42902 Soybean cytosol 46.67 46.46
KRH19668 Soybean cytosol, endoplasmic reticulum, mitochondrion 40.89 46.0
KRG90592 Soybean cytosol 44.44 45.05
KRH59019 Soybean cytosol 44.44 44.64
KRH19667 Soybean endoplasmic reticulum, extracellular 43.56 43.95
KRH34584 Soybean cytosol 41.33 41.7
KRH54548 Soybean cytosol 42.67 40.85
KRH62275 Soybean cytosol 19.11 38.05
KRH42905 Soybean cytosol 47.11 37.19
KRG92200 Soybean extracellular 37.33 34.01
Protein Annotations
Gene3D:1.20.1050.10EntrezGene:100527851MapMan:18.8.1.4Gene3D:3.40.30.10ProteinID:AAA33943.1ProteinID:AAA33973.1
EMBL:BT092734UniProt:C6T5M2ncoils:CoilEnsemblPlantsGene:GLYMA_07G139700GO:GO:0003674GO:GO:0003824
GO:GO:0004364GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006749GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009407GO:GO:0009408GO:GO:0009628GO:GO:0009719GO:GO:0009733GO:GO:0009735
GO:GO:0009737GO:GO:0009739GO:GO:0009987GO:GO:0010038GO:GO:0016740GO:GO:0019748
InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987
EMBL:KM818441EnsemblPlants:KRH49213ProteinID:KRH49213ProteinID:KRH49213.1UniProt:P32110PFAM:PF00043
PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF486SUPFAM:SSF47616
SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000012BD44:::
Description
HSP26-Ahypothetical protein
Coordinates
chr7:+:16580549..16582074
Molecular Weight (calculated)
26012.3 Da
IEP (calculated)
5.200
GRAVY (calculated)
-0.130
Length
225 amino acids
Sequence
(BLAST)
001: MAATQEDVKL LGIVGSPFVC RVQIALKLKG VEYKFLEENL GNKSDLLLKY NPVHKKVPVF VHNEQPIAES LVIVEYIDET WKNNPILPSD PYQRALARFW
101: SKFIDDKIVG AVSKSVFTVD EKEREKNVEE TYEALQFLEN ELKDKKFFGG EEFGLVDIAA VFIAFWIPIF QEIAGLQLFT SEKFPILYKW SQEFLNHPFV
201: HEVLPPRDPL FAYFKARYES LSASK
Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)
001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN
Arabidopsis Description
GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.