CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49213	Soybean	cytosol, endoplasmic reticulum	96.89	96.89
KRH49215	Soybean	cytosol, nucleus	94.67	93.01
KRH00071	Soybean	nucleus	88.44	88.44
KRH49216	Soybean	cytosol	84.89	84.89
KRH49212	Soybean	cytosol, nucleus	84.44	84.07
KRH49219	Soybean	cytosol	36.89	83.84
KRH00075	Soybean	cytosol	82.67	82.67
KRH49221	Soybean	cytosol, extracellular	81.78	81.78
KRH49224	Soybean	cytosol	79.56	79.56
KRH49222	Soybean	cytosol	67.11	75.88
KRH00072	Soybean	cytosol	73.33	74.32
KRH49218	Soybean	cytosol	72.0	73.3
KRH17938	Soybean	cytosol	50.22	72.9
KRH75749	Soybean	cytosol	65.33	67.12
KRH62422	Soybean	cytosol	65.33	66.82
KRH62423	Soybean	cytosol	64.89	64.6
KRH75750	Soybean	cytosol, nucleus	64.0	63.72
KRH62274	Soybean	extracellular	28.44	62.14
KRH54547	Soybean	cytosol	28.44	55.65
KRH59021	Soybean	cytosol, nucleus	48.44	48.66
KRH72040	Soybean	cytosol	48.44	48.44
KRH52989	Soybean	cytosol	33.33	48.08
KRH59020	Soybean	cytosol	47.56	46.72
KRH42903	Soybean	cytosol	47.11	46.49
KRH59018	Soybean	cytosol	44.44	46.08
KRH42902	Soybean	cytosol	45.78	45.58
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	39.56	44.5
KRH59019	Soybean	cytosol	44.0	44.2
KRG90592	Soybean	cytosol	43.56	44.14
KRH19667	Soybean	endoplasmic reticulum, extracellular	42.22	42.6
KRH34584	Soybean	cytosol	40.89	41.26
KRH54548	Soybean	cytosol	42.67	40.85
KRH62275	Soybean	cytosol	18.67	37.17
KRH42905	Soybean	cytosol	46.67	36.84
KRG92200	Soybean	extracellular	36.89	33.6

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100807613	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02004341	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G139800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	UniProt:I1KK57	InterPro:IPR004045
InterPro:IPR010987	EMBL:KM818442	EnsemblPlants:KRH49214	ProteinID:KRH49214	ProteinID:KRH49214.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002338D93	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:16584812..16587894

Molecular Weight (calculated)

26023.3 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.136

Length

225 amino acids

Sequence
(BLAST)

001: MAATQEDVKL LGIVGSPFVC RVQIALKLKG VEYKFLEENL GNKSDLLLKY NPVHKKVPVF VHNEQPIAES LVIVEYIDET WKNNPILPSD PYQRALARFW
101: SKFIDDKIVG AVWKSVFTVD EKEREKNVEE TYEALQFLEN ELKDKKFFGG EEFGLVDIAA VFIAFWIPIF QEIAGLQLFT SEKFPILYKW SEESLNHPLV
201: QEVLPPRDPL FTFFKARYES LSASK

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.