CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92200	Soybean	extracellular	70.4	63.56
KRH62274	Soybean	extracellular	27.8	60.19
KRH49219	Soybean	cytosol	24.22	54.55
KRH54547	Soybean	cytosol	25.11	48.7
KRG90592	Soybean	cytosol	47.09	47.3
KRH62422	Soybean	cytosol	46.19	46.82
KRH75749	Soybean	cytosol	45.74	46.58
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	40.36	45.0
KRH59019	Soybean	cytosol	44.84	44.64
KRH62423	Soybean	cytosol	44.39	43.81
KRH52989	Soybean	cytosol	30.49	43.59
KRH49224	Soybean	cytosol	43.95	43.56
KRH59018	Soybean	cytosol	42.15	43.32
KRH49221	Soybean	cytosol, extracellular	43.5	43.11
KRH00071	Soybean	nucleus	43.5	43.11
KRH19667	Soybean	endoplasmic reticulum, extracellular	43.05	43.05
KRH75750	Soybean	cytosol, nucleus	43.5	42.92
KRH49212	Soybean	cytosol, nucleus	43.5	42.92
KRH00075	Soybean	cytosol	43.05	42.67
KRH49216	Soybean	cytosol	42.6	42.22
KRH59021	Soybean	cytosol, nucleus	41.7	41.52
KRH00072	Soybean	cytosol	41.26	41.44
KRH49213	Soybean	cytosol, endoplasmic reticulum	41.7	41.33
KRH49222	Soybean	cytosol	36.77	41.21
KRH49214	Soybean	cytosol	41.26	40.89
Solyc12g097080.1.1	Tomato	cytosol, endoplasmic reticulum	40.36	40.72
KRH49218	Soybean	cytosol	40.36	40.72
KRH42902	Soybean	cytosol	41.26	40.71
KRH59020	Soybean	cytosol	41.26	40.17
KRH42903	Soybean	cytosol	40.81	39.91
PGSC0003DMT400022251	Potato	cytosol	33.18	39.78
KRH49215	Soybean	cytosol, nucleus	40.36	39.3
KRH72040	Soybean	cytosol	39.46	39.11
KRH54548	Soybean	cytosol	40.36	38.3
KRH17938	Soybean	cytosol	26.46	38.06
KRH42905	Soybean	cytosol	43.05	33.68
KRH62275	Soybean	cytosol	13.45	26.55

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:547584	EMBL:ACUP02006610	EnsemblPlantsGene:GLYMA_10G192900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	UniProt:I1LCH6	InterPro:IPR004045	InterPro:IPR010987
EMBL:KM818455	EnsemblPlants:KRH34584	ProteinID:KRH34584	ProteinID:KRH34584.1	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF496	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000233D3A7	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:42520164..42521317

Molecular Weight (calculated)

26344.7 Da

IEP (calculated)

5.387

GRAVY (calculated)

-0.248

Length

223 amino acids

Sequence
(BLAST)

001: MAEVKLHGFW YSPYTLRVVW TLKLKDIPYQ NIEEDRYNKS LQLLEYNPVY KKTPVLVHNG KPLCESMLIV EYIDEIWSHN SLLPADPYER ALARFWVKYA
101: DDDMFSAVIA FFLSNNDEER EKSIEKIWEH LRVVENQCFG DQKKFFGGDI INIMDIAFGS IFKILVVAED ILDAKVLEDE KFPHLHSWYN NFKDVAVIKE
201: NLPDHEKMVA FAKFIREKRL ACT

Best Arabidopsis Sequence Match ( AT1G59670.1 )
(BLAST)

001: MGEREEVKLL GTWYSPVVIR AKIALRLKSV DYDYVEEDLF GSKSELLLKS NPIFKKVPVL IHNTKPVCVS LNIVEYIDET WNSSGSSILP SHPYDRALAR
101: FWSVFVDDKW LPTLMAAVVA KSEEAKAKGM EEVEEGLLQL EAAFIALSKG KSFFGGETIG FIDICLGSFL VLLKAREKLK NEKILDELKT PSLYRWANQF
201: LSNEMVKNVV PDIDKVAKFI EEFEDRAQYI RCF

Arabidopsis Description

GSTU15GSTU15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.